乙二醇同化作用的合成代谢途径优于天然代谢途径

Michelle Feigis, Radhakrishnan Mahadevan
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摘要

在摆脱化石燃料对化学品和燃料生产的依赖方面,生物制造可以发挥关键作用。人们对不与粮食生产争夺土地的传统糖类替代生物生产原料越来越感兴趣。乙二醇是一种 C2 化合物,可从塑料废弃物中回收,或以越来越高的效率从二氧化碳中提取,作为微生物过程的碳源正受到越来越多的关注。在此,我们回顾了目前可用于乙二醇同化的天然和合成代谢途径。我们从生物质和增值产品的最高理论产量、热力学有利性、最低酶成本以及与中心碳代谢的正交性等方面对这些途径进行了比较。我们发现,就所分析的大多数生物产品和生物质而言,合成途径在热力学驱动力、酶成本和理论产量方面均优于天然途径。然而,与合成途径相比,自然同化途径与生长相关反应的正交性相同甚至更强。鉴于这些权衡,最佳的 EG 同化途径可能取决于产品和工艺的选择。
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Synthetic metabolic pathways for ethylene glycol assimilation outperform natural counterparts
Biomanufacturing can play a pivotal role in the transition away from fossil fuel dependence for the production of chemicals and fuels. There is growing interest in alternative bioproduction feedstocks to conventional sugars that do not compete for land use with food production. Ethylene glycol, a C2 compound that can be recovered from plastic waste or derived from carbon dioxide with increasing efficiency, is gaining attention as a carbon source for microbial processes. Here we review the natural and synthetic metabolic pathways currently available for ethylene glycol assimilation. The pathways are compared in terms of their maximum theoretical yields for biomass and value-added products, thermodynamic favourability, minimum enzyme costs, and orthogonality to central carbon metabolism. We find that synthetic pathways outperform their natural counterparts in terms of higher thermodynamic driving forces, reduced enzyme costs, and higher theoretical yields for the majority of bioproducts analyzed as well as for biomass. However, natural assimilation pathways are equally or even more orthogonal to growth-associated reactions than synthetic pathways. Given these tradeoffs, the optimal EG assimilation pathway may depend on product and process choice.
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