利用机器学习方法识别具有不同临床轨迹和死亡率的四个新型急性-慢性肝衰竭集群

IF 6.6 1区 医学 Q1 GASTROENTEROLOGY & HEPATOLOGY Alimentary Pharmacology & Therapeutics Pub Date : 2024-09-23 DOI:10.1111/apt.18274
Nipun Verma, Pratibha Garg, Arun Valsan, Akash Roy, Saurabh Mishra, Parminder Kaur, Sahaj Rathi, Arka De, Madhumita Premkumar, Sunil Taneja, Virendra Singh, Radha K. Dhiman, Ajay K. Duseja, Patrick Kamath
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Cluster assignments, patient trajectories and survival were analysed through inferential statistics. Supervised ML models were trained in 70% data that predicted clusters in remaining 30% data followed by an temporal validation.ResultsThe cohort was male‐predominant (87%), aged 44.3 years, with alcohol‐associated hepatitis (62.9%) and survival of 50.5%. Due to poor performance of distance‐ and density‐based algorithms and better explainability, the latent class model (LCM) was selected for exploration. LCM revealed four clusters with distinct trajectories, reversibility and survival (independent of MELD, CLIF‐C ACLF and AARC scores). Cluster1 had patients with none/one organ failure and highest reversibility. Cluster2 had females with viral hepatitis and two organ failures. More‐than‐one acute precipitant, severity, infections, organ failures and irreversibility escalated from clusters 1 to 4. Circulatory and renal failures critically influenced cluster assignments. Incorporating clusters to CLIF‐C ACLF, infection and ACLF definition improved the discriminative accuracy of CLIF‐C‐ACLF by 11%. Extreme gradient boost and decision trees could predict clusters with AUCs of 0.989 (0.979–0.995) and 0.875 (0.865–0.890). MELD, CLIF‐C‐OF, haemoglobin, lactate, CLIF‐C‐ACLF and ALT were critical variables for cluster prediction. Clusters with distinct survival were documented in a temporal validation cohort.ConclusionsML for the first time could identify clusters with distinct phenotypes, trajectories and outcomes in ACLF. 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引用次数: 0

摘要

摘要背景与目的机器学习(ML)可以识别急性慢性活体功能衰竭(ACLF)等异质性疾病中的隐藏模式,而无需假设。我们采用 ML 来描述和预测 ACLF 中未知的聚类。方法对一家三级医疗中心的 1568 名 ACLF 患者的临床数据(2015-2023 年)进行了基于距离、密度和模型的聚类算法分析。最终模型根据最佳聚类分离度,即剪影宽度和邓恩指数(基于距离或密度的算法)以及最小BIC(基于模型的算法)进行选择。聚类分配、患者轨迹和存活率通过推断统计进行分析。在 70% 的数据中训练有监督的 ML 模型,在剩余 30% 的数据中预测聚类,然后进行时间验证。由于基于距离和密度的算法性能较差,而潜在类模型(LCM)具有更好的可解释性,因此被选中进行探索。LCM 揭示了四个具有不同轨迹、可逆性和存活率的群组(与 MELD、CLIF-C ACLF 和 AARC 评分无关)。群组 1 的患者无/单器官衰竭,可逆性最高。组群 2 中的女性患者患有病毒性肝炎,并有两个器官衰竭。从第 1 组到第 4 组,急性诱因、严重程度、感染、器官功能衰竭和不可逆性逐组递增。在 CLIF-C ACLF、感染和 ACLF 定义中加入聚类可将 CLIF-C-ACLF 的判别准确率提高 11%。极梯度提升和决策树可以预测集群,AUC 分别为 0.989(0.979-0.995)和 0.875(0.865-0.890)。MELD、CLIF-C-OF、血红蛋白、乳酸、CLIF-C-ACLF 和 ALT 是群组预测的关键变量。结论ML首次发现了在ACLF中具有不同表型、轨迹和结局的集群。对集群进行分层可以解决异质性问题,指导 ACLF 的预后、试验招募、资源分配和肝移植讨论。
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Identification of four novel acute‐on‐chronic liver failure clusters with distinct clinical trajectories and mortality using machine learning methods
SummaryBackground and AimsMachine learning (ML) can identify the hidden patterns without hypothesis in heterogeneous diseases like acute‐on‐chronic live failure (ACLF). We employed ML to describe and predict yet unknown clusters in ACLF.MethodsClinical data of 1568 patients with ACLF from a tertiary care centre (2015–2023) were subjected to distance‐, density‐ and model‐based clustering algorithms. Final model was selected on best cluster separation, viz. Silhouette width and Dunn's index (for distance‐ or density‐based algorithms) and minimum BIC (for model‐based algorithms). Cluster assignments, patient trajectories and survival were analysed through inferential statistics. Supervised ML models were trained in 70% data that predicted clusters in remaining 30% data followed by an temporal validation.ResultsThe cohort was male‐predominant (87%), aged 44.3 years, with alcohol‐associated hepatitis (62.9%) and survival of 50.5%. Due to poor performance of distance‐ and density‐based algorithms and better explainability, the latent class model (LCM) was selected for exploration. LCM revealed four clusters with distinct trajectories, reversibility and survival (independent of MELD, CLIF‐C ACLF and AARC scores). Cluster1 had patients with none/one organ failure and highest reversibility. Cluster2 had females with viral hepatitis and two organ failures. More‐than‐one acute precipitant, severity, infections, organ failures and irreversibility escalated from clusters 1 to 4. Circulatory and renal failures critically influenced cluster assignments. Incorporating clusters to CLIF‐C ACLF, infection and ACLF definition improved the discriminative accuracy of CLIF‐C‐ACLF by 11%. Extreme gradient boost and decision trees could predict clusters with AUCs of 0.989 (0.979–0.995) and 0.875 (0.865–0.890). MELD, CLIF‐C‐OF, haemoglobin, lactate, CLIF‐C‐ACLF and ALT were critical variables for cluster prediction. Clusters with distinct survival were documented in a temporal validation cohort.ConclusionsML for the first time could identify clusters with distinct phenotypes, trajectories and outcomes in ACLF. Stratification into clusters can address heterogeneity, guide prognosis, recruitment in trials, resource allocation and liver transplant discussions in ACLF.
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来源期刊
CiteScore
15.60
自引率
7.90%
发文量
527
审稿时长
3-6 weeks
期刊介绍: Alimentary Pharmacology & Therapeutics is a global pharmacology journal focused on the impact of drugs on the human gastrointestinal and hepato-biliary systems. It covers a diverse range of topics, often with immediate clinical relevance to its readership.
期刊最新文献
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