Tahira Saleem, Huasong Zou, Tao Zhuo, Xiaojing Fan
{"title":"一种 LysR 型调控因子影响着 Ralstonia solanacearum GMI1000 的游动性、半乳糖利用率和毒力","authors":"Tahira Saleem, Huasong Zou, Tao Zhuo, Xiaojing Fan","doi":"10.1186/s40538-024-00675-w","DOIUrl":null,"url":null,"abstract":"<div><h3>Background</h3><p>LysR-type transcriptional regulators (LTTRs) are one of the largest families of regulators in prokaryotic organism, which help the bacterium adapt to diverse conditions by controlling a wide array of regulons, encompassing genes responsible for nitrogen and carbon fixation, oxidative stress response, bacterial virulence, and the breakdown of diverse compounds. <i>Ralstonia solanacearum</i> strain GMI1000 possesses 80 LTTR genes, yet the precise roles and functional contributions of only three of these LTTRs have been conclusively established among the total. In this work, our group reveal a novel LTTR member LysR7 (RS_RS02375) that exerts multiple regulatory roles in motility, carbon metabolism and virulence.</p><h3>Results</h3><p>In this investigation, an in-frame deletion mutant Δ<i>lysR7</i> and a complemented strain CΔ<i>lysR7</i> were prepared. The mutant Δ<i>lysR7</i> had increased swimming motility on semi-soft medium and showed a reduced replication rate in nutrient-rich medium and <i>in planta</i>. Moreover, Δ<i>lysR7</i> was unable to grow on nutrient-limited medium, supplemented with galactose as a single carbon resource. RT-qPCR analysis and GUS activity detection indicated that the expression of <i>lysR7</i> was induced in the presence of galactose. The mutant Δ<i>lysR7</i> caused weaker wilt disease on either <i>Solanum lycopersicum</i> or <i>Capsicum annuum</i> plants compared to both wild type GMI1000 and CΔ<i>lysR7</i>. Transcriptome analysis revealed that 12 upregulated and 8 downregulated differentially expressed genes (DEGs) in Δ<i>lysR7</i> were restored in CΔ<i>lysR7</i> relative to wild type. In particular, the expression of <i>hrpG</i>, a key gene responsible for type III secretion system, was downregulated. KEGG analysis revealed that, except for <i>lysR7</i> gene, the 19 DEGs were most enriched in microbial metabolism in diverse environments and metabolic pathways.</p><h3>Conclusions</h3><p>The data indicate that LysR7 regulates multiple processes in association with motility, galactose metabolism and virulence in <i>R. solanacearum</i>. The study offers valuable evidence to understand comprehensive regulatory mechanisms mediated by LTTR family members in <i>R. solanacearum</i>.</p><h3>Graphical Abstract</h3>\n<div><figure><div><div><picture><source><img></source></picture></div></div></figure></div></div>","PeriodicalId":512,"journal":{"name":"Chemical and Biological Technologies in Agriculture","volume":"11 1","pages":""},"PeriodicalIF":5.2000,"publicationDate":"2024-10-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://chembioagro.springeropen.com/counter/pdf/10.1186/s40538-024-00675-w","citationCount":"0","resultStr":"{\"title\":\"A LysR-type regulator influencing swimming motility, galactose utilization, and virulence in Ralstonia solanacearum GMI1000\",\"authors\":\"Tahira Saleem, Huasong Zou, Tao Zhuo, Xiaojing Fan\",\"doi\":\"10.1186/s40538-024-00675-w\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><h3>Background</h3><p>LysR-type transcriptional regulators (LTTRs) are one of the largest families of regulators in prokaryotic organism, which help the bacterium adapt to diverse conditions by controlling a wide array of regulons, encompassing genes responsible for nitrogen and carbon fixation, oxidative stress response, bacterial virulence, and the breakdown of diverse compounds. <i>Ralstonia solanacearum</i> strain GMI1000 possesses 80 LTTR genes, yet the precise roles and functional contributions of only three of these LTTRs have been conclusively established among the total. In this work, our group reveal a novel LTTR member LysR7 (RS_RS02375) that exerts multiple regulatory roles in motility, carbon metabolism and virulence.</p><h3>Results</h3><p>In this investigation, an in-frame deletion mutant Δ<i>lysR7</i> and a complemented strain CΔ<i>lysR7</i> were prepared. The mutant Δ<i>lysR7</i> had increased swimming motility on semi-soft medium and showed a reduced replication rate in nutrient-rich medium and <i>in planta</i>. Moreover, Δ<i>lysR7</i> was unable to grow on nutrient-limited medium, supplemented with galactose as a single carbon resource. RT-qPCR analysis and GUS activity detection indicated that the expression of <i>lysR7</i> was induced in the presence of galactose. The mutant Δ<i>lysR7</i> caused weaker wilt disease on either <i>Solanum lycopersicum</i> or <i>Capsicum annuum</i> plants compared to both wild type GMI1000 and CΔ<i>lysR7</i>. Transcriptome analysis revealed that 12 upregulated and 8 downregulated differentially expressed genes (DEGs) in Δ<i>lysR7</i> were restored in CΔ<i>lysR7</i> relative to wild type. In particular, the expression of <i>hrpG</i>, a key gene responsible for type III secretion system, was downregulated. KEGG analysis revealed that, except for <i>lysR7</i> gene, the 19 DEGs were most enriched in microbial metabolism in diverse environments and metabolic pathways.</p><h3>Conclusions</h3><p>The data indicate that LysR7 regulates multiple processes in association with motility, galactose metabolism and virulence in <i>R. solanacearum</i>. 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A LysR-type regulator influencing swimming motility, galactose utilization, and virulence in Ralstonia solanacearum GMI1000
Background
LysR-type transcriptional regulators (LTTRs) are one of the largest families of regulators in prokaryotic organism, which help the bacterium adapt to diverse conditions by controlling a wide array of regulons, encompassing genes responsible for nitrogen and carbon fixation, oxidative stress response, bacterial virulence, and the breakdown of diverse compounds. Ralstonia solanacearum strain GMI1000 possesses 80 LTTR genes, yet the precise roles and functional contributions of only three of these LTTRs have been conclusively established among the total. In this work, our group reveal a novel LTTR member LysR7 (RS_RS02375) that exerts multiple regulatory roles in motility, carbon metabolism and virulence.
Results
In this investigation, an in-frame deletion mutant ΔlysR7 and a complemented strain CΔlysR7 were prepared. The mutant ΔlysR7 had increased swimming motility on semi-soft medium and showed a reduced replication rate in nutrient-rich medium and in planta. Moreover, ΔlysR7 was unable to grow on nutrient-limited medium, supplemented with galactose as a single carbon resource. RT-qPCR analysis and GUS activity detection indicated that the expression of lysR7 was induced in the presence of galactose. The mutant ΔlysR7 caused weaker wilt disease on either Solanum lycopersicum or Capsicum annuum plants compared to both wild type GMI1000 and CΔlysR7. Transcriptome analysis revealed that 12 upregulated and 8 downregulated differentially expressed genes (DEGs) in ΔlysR7 were restored in CΔlysR7 relative to wild type. In particular, the expression of hrpG, a key gene responsible for type III secretion system, was downregulated. KEGG analysis revealed that, except for lysR7 gene, the 19 DEGs were most enriched in microbial metabolism in diverse environments and metabolic pathways.
Conclusions
The data indicate that LysR7 regulates multiple processes in association with motility, galactose metabolism and virulence in R. solanacearum. The study offers valuable evidence to understand comprehensive regulatory mechanisms mediated by LTTR family members in R. solanacearum.
期刊介绍:
Chemical and Biological Technologies in Agriculture is an international, interdisciplinary, peer-reviewed forum for the advancement and application to all fields of agriculture of modern chemical, biochemical and molecular technologies. The scope of this journal includes chemical and biochemical processes aimed to increase sustainable agricultural and food production, the evaluation of quality and origin of raw primary products and their transformation into foods and chemicals, as well as environmental monitoring and remediation. Of special interest are the effects of chemical and biochemical technologies, also at the nano and supramolecular scale, on the relationships between soil, plants, microorganisms and their environment, with the help of modern bioinformatics. Another special focus is the use of modern bioorganic and biological chemistry to develop new technologies for plant nutrition and bio-stimulation, advancement of biorefineries from biomasses, safe and traceable food products, carbon storage in soil and plants and restoration of contaminated soils to agriculture.
This journal presents the first opportunity to bring together researchers from a wide number of disciplines within the agricultural chemical and biological sciences, from both industry and academia. The principle aim of Chemical and Biological Technologies in Agriculture is to allow the exchange of the most advanced chemical and biochemical knowledge to develop technologies which address one of the most pressing challenges of our times - sustaining a growing world population.
Chemical and Biological Technologies in Agriculture publishes original research articles, short letters and invited reviews. Articles from scientists in industry, academia as well as private research institutes, non-governmental and environmental organizations are encouraged.