一种 LysR 型调控因子影响着 Ralstonia solanacearum GMI1000 的游动性、半乳糖利用率和毒力

IF 5.2 2区 农林科学 Q1 AGRICULTURE, MULTIDISCIPLINARY Chemical and Biological Technologies in Agriculture Pub Date : 2024-10-03 DOI:10.1186/s40538-024-00675-w
Tahira Saleem, Huasong Zou, Tao Zhuo, Xiaojing Fan
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引用次数: 0

摘要

背景LysR型转录调控子(LTTRs)是原核生物中最大的调控子家族之一,它通过控制一系列调控子帮助细菌适应各种条件,包括负责固氮和固碳、氧化应激反应、细菌毒力和分解各种化合物的基因。Ralstonia solanacearum菌株GMI1000拥有80个LTTR基因,但其中只有三个LTTR基因的确切作用和功能贡献得到了确证。本研究揭示了一个新的 LTTR 成员 LysR7 (RS_RS02375),它在运动、碳代谢和毒力方面发挥着多重调控作用。突变体ΔlysR7在半软培养基上的游动性增强,在富营养培养基和植物体内的复制率降低。此外,ΔlysR7 无法在补充了半乳糖作为单一碳资源的营养有限的培养基上生长。RT-qPCR 分析和 GUS 活性检测表明,在半乳糖存在的情况下,lysR7 的表达受到诱导。与野生型 GMI1000 和 CΔlysR7 相比,突变体 ΔlysR7 在茄属植物或辣椒上引起的枯萎病较弱。转录组分析表明,与野生型相比,CΔlysR7 恢复了 ΔlysR7 中 12 个上调和 8 个下调的差异表达基因(DEGs)。特别是负责 III 型分泌系统的关键基因 hrpG 的表达下调。KEGG分析表明,除lysR7基因外,19个DEGs在不同环境和代谢途径中的微生物代谢中最为富集。该研究为了解茄红菌中由 LTTR 家族成员介导的综合调控机制提供了宝贵的证据。
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A LysR-type regulator influencing swimming motility, galactose utilization, and virulence in Ralstonia solanacearum GMI1000

Background

LysR-type transcriptional regulators (LTTRs) are one of the largest families of regulators in prokaryotic organism, which help the bacterium adapt to diverse conditions by controlling a wide array of regulons, encompassing genes responsible for nitrogen and carbon fixation, oxidative stress response, bacterial virulence, and the breakdown of diverse compounds. Ralstonia solanacearum strain GMI1000 possesses 80 LTTR genes, yet the precise roles and functional contributions of only three of these LTTRs have been conclusively established among the total. In this work, our group reveal a novel LTTR member LysR7 (RS_RS02375) that exerts multiple regulatory roles in motility, carbon metabolism and virulence.

Results

In this investigation, an in-frame deletion mutant ΔlysR7 and a complemented strain CΔlysR7 were prepared. The mutant ΔlysR7 had increased swimming motility on semi-soft medium and showed a reduced replication rate in nutrient-rich medium and in planta. Moreover, ΔlysR7 was unable to grow on nutrient-limited medium, supplemented with galactose as a single carbon resource. RT-qPCR analysis and GUS activity detection indicated that the expression of lysR7 was induced in the presence of galactose. The mutant ΔlysR7 caused weaker wilt disease on either Solanum lycopersicum or Capsicum annuum plants compared to both wild type GMI1000 and CΔlysR7. Transcriptome analysis revealed that 12 upregulated and 8 downregulated differentially expressed genes (DEGs) in ΔlysR7 were restored in CΔlysR7 relative to wild type. In particular, the expression of hrpG, a key gene responsible for type III secretion system, was downregulated. KEGG analysis revealed that, except for lysR7 gene, the 19 DEGs were most enriched in microbial metabolism in diverse environments and metabolic pathways.

Conclusions

The data indicate that LysR7 regulates multiple processes in association with motility, galactose metabolism and virulence in R. solanacearum. The study offers valuable evidence to understand comprehensive regulatory mechanisms mediated by LTTR family members in R. solanacearum.

Graphical Abstract

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来源期刊
Chemical and Biological Technologies in Agriculture
Chemical and Biological Technologies in Agriculture Biochemistry, Genetics and Molecular Biology-Biotechnology
CiteScore
6.80
自引率
3.00%
发文量
83
审稿时长
15 weeks
期刊介绍: Chemical and Biological Technologies in Agriculture is an international, interdisciplinary, peer-reviewed forum for the advancement and application to all fields of agriculture of modern chemical, biochemical and molecular technologies. The scope of this journal includes chemical and biochemical processes aimed to increase sustainable agricultural and food production, the evaluation of quality and origin of raw primary products and their transformation into foods and chemicals, as well as environmental monitoring and remediation. Of special interest are the effects of chemical and biochemical technologies, also at the nano and supramolecular scale, on the relationships between soil, plants, microorganisms and their environment, with the help of modern bioinformatics. Another special focus is the use of modern bioorganic and biological chemistry to develop new technologies for plant nutrition and bio-stimulation, advancement of biorefineries from biomasses, safe and traceable food products, carbon storage in soil and plants and restoration of contaminated soils to agriculture. This journal presents the first opportunity to bring together researchers from a wide number of disciplines within the agricultural chemical and biological sciences, from both industry and academia. The principle aim of Chemical and Biological Technologies in Agriculture is to allow the exchange of the most advanced chemical and biochemical knowledge to develop technologies which address one of the most pressing challenges of our times - sustaining a growing world population. Chemical and Biological Technologies in Agriculture publishes original research articles, short letters and invited reviews. Articles from scientists in industry, academia as well as private research institutes, non-governmental and environmental organizations are encouraged.
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