海胆 Anthocidaris crassispina 中细菌群落的分类多样性、预测代谢途径和相互作用模式

IF 4.1 2区 生物学 Q2 MICROBIOLOGY Microorganisms Pub Date : 2024-10-20 DOI:10.3390/microorganisms12102094
Xinye Chen, Li Mo, Lin Zhang, Liyu Huang, Ziqing Gao, Jingjing Peng, Zonghe Yu, Xiaoyong Zhang
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引用次数: 0

摘要

与海胆相关的细菌群落对海胆在海洋生态系统中的生理和生态至关重要。在这项研究中,我们对在中国南海大亚湾捕获的野生海胆 Anthocidaris crassispina 的细菌群落进行了表征。从肠道、体表和周围的海水样本中,我们对属于 9 个门 141 个属的 363 个扩增子序列变体进行了分类。本研究发现的主要细菌门为变形菌门、固形菌门和类杆菌门。对细菌种间相互作用的网络分析显示,不同样本的复杂性、稳定性、连通性和关系模式各不相同,在周围海水中观察到的网络最为复杂。元基因组预测突显了不同的细菌代谢途径,肠道样本和海水样本之间存在显著差异。值得注意的是,与多糖降解(包括甲壳素衍生物、淀粉和 CoM 生物合成)相关的途径明显丰富,这凸显了肠道微生物群在消化藻类中的关键作用。此外,肠道样本中的其他代谢途径也与海胆的免疫反应调节有关。总之,这项研究全面概述了海胆(A. crassispina)的细菌群落结构和潜在功能作用。
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Taxonomic Diversity, Predicted Metabolic Pathway, and Interaction Pattern of Bacterial Community in Sea Urchin Anthocidaris crassispina.

Bacterial assemblages associated with sea urchin are critical to their physiology and ecology within marine ecosystems. In this study, we characterized the bacterial communities in wild sea urchin Anthocidaris crassispina captured in Daya Bay, South China Sea. A total of 363 amplicon sequence variants belonging to nine phyla and 141 genera were classified from intestine, body surface, and surrounding seawater samples. Proteobacteria, Firmicutes, and Bacteroidetes were the dominant bacteria phyla found in this study. A network analysis of bacterial interspecies interactions revealed varying complexity, stability, connectivity, and relationship patterns across the samples, with the most intricate network observed in the surrounding seawater. Metagenomic predictions highlighted the distinct bacterial metabolic pathways, with significant differences between intestine and seawater samples. Notably, pathways associated with polysaccharide degradation, including chitin derivatives, starch, and CoM biosynthesis, were markedly abundant, underscoring the gut microbiota's key role in digesting algae. In addition, other metabolic pathways in intestine samples were linked to immune response regulation of sea urchins. Overall, this study provides a comprehensive overview of the bacterial community structure and potential functional roles in A. crassispina.

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来源期刊
Microorganisms
Microorganisms Medicine-Microbiology (medical)
CiteScore
7.40
自引率
6.70%
发文量
2168
审稿时长
20.03 days
期刊介绍: Microorganisms (ISSN 2076-2607) is an international, peer-reviewed open access journal which provides an advanced forum for studies related to prokaryotic and eukaryotic microorganisms, viruses and prions. It publishes reviews, research papers and communications. Our aim is to encourage scientists to publish their experimental and theoretical results in as much detail as possible. There is no restriction on the length of the papers. The full experimental details must be provided so that the results can be reproduced. Electronic files and software regarding the full details of the calculation or experimental procedure, if unable to be published in a normal way, can be deposited as supplementary electronic material.
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