通过人工智能优化蝎子毒素处理。

IF 4.3 3区 材料科学 Q1 ENGINEERING, ELECTRICAL & ELECTRONIC ACS Applied Electronic Materials Pub Date : 2024-10-11 DOI:10.3390/toxins16100437
Adam Psenicnik, Andres A Ojanguren-Affilastro, Matthew R Graham, Mohamed K Hassan, Mohamed A Abdel-Rahman, Prashant P Sharma, Carlos E Santibáñez-López
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引用次数: 0

摘要

蝎子毒素是一种相对较短的环状肽(蝎子毒素)。
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Optimizing Scorpion Toxin Processing through Artificial Intelligence.

Scorpion toxins are relatively short cyclic peptides (<150 amino acids) that can disrupt the opening/closing mechanisms in cell ion channels. These peptides are widely studied for several reasons including their use in drug discovery. Although improvements in RNAseq have greatly expedited the discovery of new scorpion toxins, their annotation remains challenging, mainly due to their small size. Here, we present a new pipeline to annotate toxins from scorpion transcriptomes using a neural network approach. This pipeline implements basic neural networks to sort amino acid sequences to find those that are likely toxins and thereafter predict the type of toxin represented by the sequence. We anticipate that this pipeline will accelerate the classification of scorpion toxins in forthcoming scorpion genome sequencing projects and potentially serve a useful role in identifying targets for drug development.

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CiteScore
7.20
自引率
4.30%
发文量
567
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