放射学中的真实世界联合学习:需要克服的障碍和获得的益处。

IF 4.7 2区 医学 Q1 COMPUTER SCIENCE, INFORMATION SYSTEMS Journal of the American Medical Informatics Association Pub Date : 2024-10-25 DOI:10.1093/jamia/ocae259
Markus Ralf Bujotzek, Ünal Akünal, Stefan Denner, Peter Neher, Maximilian Zenk, Eric Frodl, Astha Jaiswal, Moon Kim, Nicolai R Krekiehn, Manuel Nickel, Richard Ruppel, Marcus Both, Felix Döllinger, Marcel Opitz, Thorsten Persigehl, Jens Kleesiek, Tobias Penzkofer, Klaus Maier-Hein, Andreas Bucher, Rickmer Braren
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引用次数: 0

摘要

目标:联合学习(FL)可以在本地保存数据的同时进行协作模型训练。目前,放射学领域的大多数联机学习研究都是在模拟环境中进行的,这是因为有许多障碍阻碍了联机学习在实践中的应用。现有的少数几个真实世界 FL 计划很少介绍为克服这些障碍而采取的具体措施。为了弥补这一巨大的知识差距,我们提出了放射学真实世界 FL 综合指南。在我们努力实施真实世界 FL 的过程中,缺乏将 FL 与具有挑战性的真实世界环境中复杂性较低的替代方案进行比较的全面评估,而我们通过广泛的基准测试解决了这一问题:我们在德国放射学合作网络(RACOON)内开发了自己的 FL 基础设施,并在六所大学医院的肺部病理分割任务中对 FL 模型进行了训练,从而展示了其功能。在建立 FL 计划和进行大量基准实验的过程中,我们获得了一些启发,并将其汇编和归类到指南中:结果:所提出的指南概述了在真实世界实验中建立成功的 FL 计划的基本步骤、确定的障碍和实施的解决方案。我们的实验结果证明了指南的实用性,并表明在所有评估场景中,FL 都优于复杂度较低的替代方案:我们的研究结果证明,将 FL 转化为实际应用所需的努力是正确的,因为它比其他方法更具优势。此外,这些研究结果还强调了在现实世界中对分布式数据和基础设施进行战略性组织和稳健管理的重要性。我们提出的指南旨在帮助未来的 FL 研究人员规避陷阱,加快 FL 在放射学应用中的转化。
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Real-world federated learning in radiology: hurdles to overcome and benefits to gain.

Objective: Federated Learning (FL) enables collaborative model training while keeping data locally. Currently, most FL studies in radiology are conducted in simulated environments due to numerous hurdles impeding its translation into practice. The few existing real-world FL initiatives rarely communicate specific measures taken to overcome these hurdles. To bridge this significant knowledge gap, we propose a comprehensive guide for real-world FL in radiology. Minding efforts to implement real-world FL, there is a lack of comprehensive assessments comparing FL to less complex alternatives in challenging real-world settings, which we address through extensive benchmarking.

Materials and methods: We developed our own FL infrastructure within the German Radiological Cooperative Network (RACOON) and demonstrated its functionality by training FL models on lung pathology segmentation tasks across six university hospitals. Insights gained while establishing our FL initiative and running the extensive benchmark experiments were compiled and categorized into the guide.

Results: The proposed guide outlines essential steps, identified hurdles, and implemented solutions for establishing successful FL initiatives conducting real-world experiments. Our experimental results prove the practical relevance of our guide and show that FL outperforms less complex alternatives in all evaluation scenarios.

Discussion and conclusion: Our findings justify the efforts required to translate FL into real-world applications by demonstrating advantageous performance over alternative approaches. Additionally, they emphasize the importance of strategic organization, robust management of distributed data and infrastructure in real-world settings. With the proposed guide, we are aiming to aid future FL researchers in circumventing pitfalls and accelerating translation of FL into radiological applications.

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来源期刊
Journal of the American Medical Informatics Association
Journal of the American Medical Informatics Association 医学-计算机:跨学科应用
CiteScore
14.50
自引率
7.80%
发文量
230
审稿时长
3-8 weeks
期刊介绍: JAMIA is AMIA''s premier peer-reviewed journal for biomedical and health informatics. Covering the full spectrum of activities in the field, JAMIA includes informatics articles in the areas of clinical care, clinical research, translational science, implementation science, imaging, education, consumer health, public health, and policy. JAMIA''s articles describe innovative informatics research and systems that help to advance biomedical science and to promote health. Case reports, perspectives and reviews also help readers stay connected with the most important informatics developments in implementation, policy and education.
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