基于 SWATH-MS 的蛋白质组学揭示了甜橄榄(Osmanthus fragrans)彩色叶片中光合作用相关蛋白质和次级代谢途径的作用。

IF 3.5 2区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY BMC Genomics Pub Date : 2024-11-01 DOI:10.1186/s12864-024-10867-1
Cheng Zhang, Kailu Zhang, Min Zhang, Daowu Zhang, Qi Ye, Xianrong Wang, Takashi Akagi, Yifan Duan
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引用次数: 0

摘要

彩叶是一种显著的园艺特征,具有很高的研究和观赏价值。常绿橄榄(Osmanthus fragrans)是中国十大传统名花之一,已有两千多年的栽培历史。然而,近年来,越来越多具有彩色叶片的橄榄栽培品种因其观赏价值而被栽培。为了研究观察到的叶片颜色变化的分子机制,我们选择了叶片为黄白色的香紫苏'银碧双辉'(Y)和叶片为绿色的香紫苏'四季桂'(S)作为材料。根据 SWATH-MS 测序结果,共定量鉴定出 3959 个蛋白质,其中 1300 个为差异表达蛋白质(DEPs),包括 782 个上调蛋白质和 518 个下调蛋白质。DEPs 的功能富集分析表明,光合作用相关蛋白的表达下调可能导致叶绿素合成受到抑制,这可能是叶色变化的主要原因。此外,蛋白质相互作用预测模型也表明,PetC、PsbO、PsbP 和 PsbQ 等蛋白质是相互作用网络中的关键蛋白质,而参与花青素和类胡萝卜素途径的蛋白质上调可能与黄白色叶片的形成有关。综上所述,我们的研究结果代表了首个基于 SWATH-MS 的彩叶欧鼠李蛋白质组学报告,揭示了叶绿素合成和次生代谢途径有助于叶片颜色的变化。
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SWATH-MS based proteomics reveals the role of photosynthesis related proteins and secondary metabolic pathways in the colored leaves of sweet olive (Osmanthus fragrans).

Colored leaves, a notable horticultural trait, have high research and ornamental value. The evergreen sweet olive (Osmanthus fragrans), one of the top ten traditional flowers in China, has been cultivated for more than two thousand years. However, in recent years, an increasing number of O. fragrans cultivars with colored leaves have been cultivated for their ornamental value. To study the molecular mechanism underlying the observed changes in leaf color, we selected O. fragrans 'Yinbi Shuanghui' (Y), which has yellow-white leaves, and O. fragrans 'Sijigui' (S), which has green leaves, as materials. Pigment content measurement showed that the chlorophyll, carotenoid and anthocyanin contents in Y were lower than in S. According to the SWATH-MS sequencing results, a total of 3,959 proteins were quantitatively identified, 1,300 of which were differentially expressed proteins (DEPs), including 782 up-regulated and 518 down-regulated proteins in Y compared to S. Functional enrichment analysis of DEPs revealed that down-regulated expression of photosynthesis related proteins may lead to the inhibition of chlorophyll synthesis in Y, this may be the main cause of leaf color change. Moreover, a protein interaction prediction model also showed that proteins such as PetC, PsbO, PsbP, and PsbQ were key proteins in the interaction network, and the up-regulated proteins participating in the anthocyanin and carotenoid pathways may be related to the formation of yellow-white leaves. Taken together, our findings represent the first SWATH-MS-based proteomic report on colored leaf O. fragrans and reveal that chlorophyll synthesis and secondary metabolism pathways contribute to the changes in leaf color.

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来源期刊
BMC Genomics
BMC Genomics 生物-生物工程与应用微生物
CiteScore
7.40
自引率
4.50%
发文量
769
审稿时长
6.4 months
期刊介绍: BMC Genomics is an open access, peer-reviewed journal that considers articles on all aspects of genome-scale analysis, functional genomics, and proteomics. BMC Genomics is part of the BMC series which publishes subject-specific journals focused on the needs of individual research communities across all areas of biology and medicine. We offer an efficient, fair and friendly peer review service, and are committed to publishing all sound science, provided that there is some advance in knowledge presented by the work.
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