A-S Vézina Bédard, A Michaud, F Quenette, N Singh, F de Lemos Martins, J T Wade, M Guillier, D A Lafontaine
{"title":"大肠杆菌镁离子转运的调控:5' 上游区域在 corA 表达中的作用。","authors":"A-S Vézina Bédard, A Michaud, F Quenette, N Singh, F de Lemos Martins, J T Wade, M Guillier, D A Lafontaine","doi":"10.1080/15476286.2024.2421665","DOIUrl":null,"url":null,"abstract":"<p><p>In <i>Escherichia coli</i>, transport of magnesium ions across the cellular membrane relies on MgtA and CorA transporters. While the expression of <i>mgtA</i> is controlled by the two-component system PhoQ/PhoP and 5' upstream region elements, <i>corA</i> expression is considered to be constitutive and not to depend on cellular factors. Importantly, the 5' upstream region of <i>corA</i> is predicted to fold into structures highly similar to the magnesium-sensing <i>mgtA</i> 5' upstream region. Here using biochemical and genetic assays, we show that the intracellular concentration of magnesium ions affects <i>corA</i> expression. Similarly to <i>mgtA</i>, we find that the effect of magnesium ions on <i>corA</i> expression is mediated by the 5' upstream region. We demonstrate that the RNA structure is important for regulation and that the Rho transcription factor is involved in the modulation of transcription termination. Consistent with previous studies, we find that translation of <i>corL</i>, a short ORF located within the 5' upstream region, is important for <i>corA</i> regulation. Our data indicate that the efficiency of <i>corL</i> translation is inversely proportional to <i>corA</i> expression, similar to what has been described for <i>mgtA</i> and <i>corA</i> in <i>Salmonella enterica</i>. Using a novel assay to control the import of magnesium ions, we show that while the expression of <i>mgtA</i> is regulated by both extra- and intracellular magnesium ions, <i>corA</i> is regulated by variations in intracellular magnesium ions. Our results support a model in which the expression of <i>corA</i> is regulated by the 5' upstream region that senses variations of intracellular magnesium ions.</p>","PeriodicalId":21351,"journal":{"name":"RNA Biology","volume":"21 1","pages":"94-106"},"PeriodicalIF":3.6000,"publicationDate":"2024-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11552253/pdf/","citationCount":"0","resultStr":"{\"title\":\"Regulation of magnesium ion transport in <i>Escherichia coli</i>: insights into the role of the 5' upstream region in <i>corA</i> expression.\",\"authors\":\"A-S Vézina Bédard, A Michaud, F Quenette, N Singh, F de Lemos Martins, J T Wade, M Guillier, D A Lafontaine\",\"doi\":\"10.1080/15476286.2024.2421665\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>In <i>Escherichia coli</i>, transport of magnesium ions across the cellular membrane relies on MgtA and CorA transporters. While the expression of <i>mgtA</i> is controlled by the two-component system PhoQ/PhoP and 5' upstream region elements, <i>corA</i> expression is considered to be constitutive and not to depend on cellular factors. Importantly, the 5' upstream region of <i>corA</i> is predicted to fold into structures highly similar to the magnesium-sensing <i>mgtA</i> 5' upstream region. Here using biochemical and genetic assays, we show that the intracellular concentration of magnesium ions affects <i>corA</i> expression. Similarly to <i>mgtA</i>, we find that the effect of magnesium ions on <i>corA</i> expression is mediated by the 5' upstream region. We demonstrate that the RNA structure is important for regulation and that the Rho transcription factor is involved in the modulation of transcription termination. Consistent with previous studies, we find that translation of <i>corL</i>, a short ORF located within the 5' upstream region, is important for <i>corA</i> regulation. Our data indicate that the efficiency of <i>corL</i> translation is inversely proportional to <i>corA</i> expression, similar to what has been described for <i>mgtA</i> and <i>corA</i> in <i>Salmonella enterica</i>. Using a novel assay to control the import of magnesium ions, we show that while the expression of <i>mgtA</i> is regulated by both extra- and intracellular magnesium ions, <i>corA</i> is regulated by variations in intracellular magnesium ions. Our results support a model in which the expression of <i>corA</i> is regulated by the 5' upstream region that senses variations of intracellular magnesium ions.</p>\",\"PeriodicalId\":21351,\"journal\":{\"name\":\"RNA Biology\",\"volume\":\"21 1\",\"pages\":\"94-106\"},\"PeriodicalIF\":3.6000,\"publicationDate\":\"2024-01-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11552253/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"RNA Biology\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1080/15476286.2024.2421665\",\"RegionNum\":3,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2024/11/8 0:00:00\",\"PubModel\":\"Epub\",\"JCR\":\"Q2\",\"JCRName\":\"BIOCHEMISTRY & MOLECULAR BIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"RNA Biology","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1080/15476286.2024.2421665","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/11/8 0:00:00","PubModel":"Epub","JCR":"Q2","JCRName":"BIOCHEMISTRY & MOLECULAR BIOLOGY","Score":null,"Total":0}
Regulation of magnesium ion transport in Escherichia coli: insights into the role of the 5' upstream region in corA expression.
In Escherichia coli, transport of magnesium ions across the cellular membrane relies on MgtA and CorA transporters. While the expression of mgtA is controlled by the two-component system PhoQ/PhoP and 5' upstream region elements, corA expression is considered to be constitutive and not to depend on cellular factors. Importantly, the 5' upstream region of corA is predicted to fold into structures highly similar to the magnesium-sensing mgtA 5' upstream region. Here using biochemical and genetic assays, we show that the intracellular concentration of magnesium ions affects corA expression. Similarly to mgtA, we find that the effect of magnesium ions on corA expression is mediated by the 5' upstream region. We demonstrate that the RNA structure is important for regulation and that the Rho transcription factor is involved in the modulation of transcription termination. Consistent with previous studies, we find that translation of corL, a short ORF located within the 5' upstream region, is important for corA regulation. Our data indicate that the efficiency of corL translation is inversely proportional to corA expression, similar to what has been described for mgtA and corA in Salmonella enterica. Using a novel assay to control the import of magnesium ions, we show that while the expression of mgtA is regulated by both extra- and intracellular magnesium ions, corA is regulated by variations in intracellular magnesium ions. Our results support a model in which the expression of corA is regulated by the 5' upstream region that senses variations of intracellular magnesium ions.
期刊介绍:
RNA has played a central role in all cellular processes since the beginning of life: decoding the genome, regulating gene expression, mediating molecular interactions, catalyzing chemical reactions. RNA Biology, as a leading journal in the field, provides a platform for presenting and discussing cutting-edge RNA research.
RNA Biology brings together a multidisciplinary community of scientists working in the areas of:
Transcription and splicing
Post-transcriptional regulation of gene expression
Non-coding RNAs
RNA localization
Translation and catalysis by RNA
Structural biology
Bioinformatics
RNA in disease and therapy