Alejandra Manjarres-Suarez, Anne Bozack, Andres Cardenas, Jesus Olivero-Verbel
{"title":"哥伦比亚加勒比海地区两个弱势人群中女性青少年的 DNA 甲基化与头发微量元素有关。","authors":"Alejandra Manjarres-Suarez, Anne Bozack, Andres Cardenas, Jesus Olivero-Verbel","doi":"10.1093/eep/dvae008","DOIUrl":null,"url":null,"abstract":"<p><p>Exposure to trace elements (TEs) influences DNA methylation patterns, which may be associated with disease development. Vulnerable populations, such as adolescents undergoing maturity, are susceptible to the effects of TE exposure. The aim of this study was to analyze the association of hair TE concentration with DNA methylation in a sample from female adolescents living in two communities in the Colombian Caribbean coast. Hair and blood samples were obtained from 45 females, between 13 and 16 years of age. Seventeen TEs were quantified in hair samples. DNA methylation was measured in leukocytes using the Infinium MethylationEPIC BeadChip. Linear models were employed to identify differentially methylated positions (DMPs) adjusting for age, body mass index, mother's education, and cell type composition. Among the tested elements, vanadium, chromium, nickel, copper, zinc, yttrium, tin, and barium were significantly associated with DMPs (false discovery rate < 0.05), registering 225, 1, 2, 184, 1, 209 189, and 104 hits, respectively. Most of the DMPs were positively associated with TEs and located in open sea regions. The greatest number of DMPs was annotated to the <i>HOXA3</i> and <i>FOXO3</i> genes, related to regulation of gene expression and oxidative stress, respectively. These findings suggest that DNA methylation may be involved in linking exposure to TEs among female adolescents to downstream health risks.</p>","PeriodicalId":11774,"journal":{"name":"Environmental Epigenetics","volume":"10 1","pages":"dvae008"},"PeriodicalIF":4.8000,"publicationDate":"2024-06-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11548963/pdf/","citationCount":"0","resultStr":"{\"title\":\"DNA methylation is associated with hair trace elements in female adolescents from two vulnerable populations in the Colombian Caribbean.\",\"authors\":\"Alejandra Manjarres-Suarez, Anne Bozack, Andres Cardenas, Jesus Olivero-Verbel\",\"doi\":\"10.1093/eep/dvae008\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Exposure to trace elements (TEs) influences DNA methylation patterns, which may be associated with disease development. Vulnerable populations, such as adolescents undergoing maturity, are susceptible to the effects of TE exposure. The aim of this study was to analyze the association of hair TE concentration with DNA methylation in a sample from female adolescents living in two communities in the Colombian Caribbean coast. Hair and blood samples were obtained from 45 females, between 13 and 16 years of age. Seventeen TEs were quantified in hair samples. DNA methylation was measured in leukocytes using the Infinium MethylationEPIC BeadChip. Linear models were employed to identify differentially methylated positions (DMPs) adjusting for age, body mass index, mother's education, and cell type composition. Among the tested elements, vanadium, chromium, nickel, copper, zinc, yttrium, tin, and barium were significantly associated with DMPs (false discovery rate < 0.05), registering 225, 1, 2, 184, 1, 209 189, and 104 hits, respectively. Most of the DMPs were positively associated with TEs and located in open sea regions. The greatest number of DMPs was annotated to the <i>HOXA3</i> and <i>FOXO3</i> genes, related to regulation of gene expression and oxidative stress, respectively. These findings suggest that DNA methylation may be involved in linking exposure to TEs among female adolescents to downstream health risks.</p>\",\"PeriodicalId\":11774,\"journal\":{\"name\":\"Environmental Epigenetics\",\"volume\":\"10 1\",\"pages\":\"dvae008\"},\"PeriodicalIF\":4.8000,\"publicationDate\":\"2024-06-20\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11548963/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Environmental Epigenetics\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1093/eep/dvae008\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2024/1/1 0:00:00\",\"PubModel\":\"eCollection\",\"JCR\":\"Q1\",\"JCRName\":\"GENETICS & HEREDITY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Environmental Epigenetics","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1093/eep/dvae008","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/1/1 0:00:00","PubModel":"eCollection","JCR":"Q1","JCRName":"GENETICS & HEREDITY","Score":null,"Total":0}
引用次数: 0
摘要
暴露于微量元素(TEs)会影响 DNA 甲基化模式,这可能与疾病的发展有关。易受影响的人群,如处于成熟期的青少年,很容易受到暴露于 TE 的影响。本研究的目的是分析生活在哥伦比亚加勒比海沿岸两个社区的女性青少年样本中头发中 TE 浓度与 DNA 甲基化之间的关系。研究人员采集了 45 名 13 至 16 岁女性的头发和血液样本。对头发样本中的 17 种 TE 进行了量化。使用 Infinium MethylationEPIC BeadChip 对白细胞中的 DNA 甲基化进行了测量。采用线性模型识别差异甲基化位置(DMPs),并对年龄、体重指数、母亲教育程度和细胞类型组成进行调整。在检测的元素中,钒、铬、镍、铜、锌、钇、锡和钡与 DMPs 显著相关(假发现率 HOXA3 和 FOXO3 基因分别与基因表达调控和氧化应激有关)。这些研究结果表明,DNA甲基化可能与女性青少年暴露于 TEs 与下游健康风险有关。
DNA methylation is associated with hair trace elements in female adolescents from two vulnerable populations in the Colombian Caribbean.
Exposure to trace elements (TEs) influences DNA methylation patterns, which may be associated with disease development. Vulnerable populations, such as adolescents undergoing maturity, are susceptible to the effects of TE exposure. The aim of this study was to analyze the association of hair TE concentration with DNA methylation in a sample from female adolescents living in two communities in the Colombian Caribbean coast. Hair and blood samples were obtained from 45 females, between 13 and 16 years of age. Seventeen TEs were quantified in hair samples. DNA methylation was measured in leukocytes using the Infinium MethylationEPIC BeadChip. Linear models were employed to identify differentially methylated positions (DMPs) adjusting for age, body mass index, mother's education, and cell type composition. Among the tested elements, vanadium, chromium, nickel, copper, zinc, yttrium, tin, and barium were significantly associated with DMPs (false discovery rate < 0.05), registering 225, 1, 2, 184, 1, 209 189, and 104 hits, respectively. Most of the DMPs were positively associated with TEs and located in open sea regions. The greatest number of DMPs was annotated to the HOXA3 and FOXO3 genes, related to regulation of gene expression and oxidative stress, respectively. These findings suggest that DNA methylation may be involved in linking exposure to TEs among female adolescents to downstream health risks.