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Epigenetics of Violence Against Women: A Systematic Review of the Literature 暴力侵害妇女行为的表观遗传学:文献系统回顾
IF 4.8 Q1 GENETICS & HEREDITY Pub Date : 2024-08-10 DOI: 10.1093/eep/dvae012
Paolo Bailo, Andrea Piccinini, G. Barbara, Palmina Caruso, Valentina Bollati, Simona Gaudi
Violence against women is a pervasive global issue with profound impacts on victims’ well-being, extending across cultural boundaries. Besides immediate physical harm, it triggers mental health consequences such as post-traumatic stress disorder (PTSD). Indeed, it is the trauma experienced during a violent event that can lead to epigenetic modifications, ultimately contributing to the onset of PTSD. While research on trauma’s epigenetic effects initially focused on war veterans and disaster survivors, there’s a dearth of studies on violence against women. In this article, we performed a systematic review aimed to fill this gap, examining existing studies on violence’s epigenetic impact on adult women. The review assessed sample sizes, study validity and gene-specific investigations. Currently, there’s insufficient data for a comprehensive meta-analysis, highlighting a nascent stage in understanding this complex issue. Future research is crucial for deeper insights into epigenetic mechanisms related to violence against women, contributing to improved interventions and support health care systems for affected individuals.
暴力侵害妇女是一个普遍存在的全球性问题,对受害者的福祉产生了深远的影响,而且跨越了文化的界限。除了直接的身体伤害,它还会引发心理健康后果,如创伤后应激障碍(PTSD)。事实上,在暴力事件中经历的创伤会导致表观遗传学的改变,最终导致创伤后应激障碍的发生。有关创伤对表观遗传学影响的研究最初主要集中在退伍军人和灾难幸存者身上,而对暴力侵害妇女行为的研究却十分匮乏。在这篇文章中,我们进行了一项旨在填补这一空白的系统性综述,考察了有关暴力对成年女性表观遗传影响的现有研究。综述评估了样本大小、研究的有效性和特定基因的调查。目前,还没有足够的数据来进行全面的荟萃分析,这凸显了人们对这一复杂问题的认识还处于初级阶段。未来的研究对于深入了解与暴力侵害妇女有关的表观遗传学机制至关重要,有助于改进干预措施和支持受影响个人的医疗保健系统。
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引用次数: 0
Epigenetics of Violence Against Women: A Systematic Review of the Literature 暴力侵害妇女行为的表观遗传学:文献系统回顾
IF 4.8 Q1 GENETICS & HEREDITY Pub Date : 2024-08-10 DOI: 10.1093/eep/dvae012
Paolo Bailo, Andrea Piccinini, G. Barbara, Palmina Caruso, Valentina Bollati, Simona Gaudi
Violence against women is a pervasive global issue with profound impacts on victims’ well-being, extending across cultural boundaries. Besides immediate physical harm, it triggers mental health consequences such as post-traumatic stress disorder (PTSD). Indeed, it is the trauma experienced during a violent event that can lead to epigenetic modifications, ultimately contributing to the onset of PTSD. While research on trauma’s epigenetic effects initially focused on war veterans and disaster survivors, there’s a dearth of studies on violence against women. In this article, we performed a systematic review aimed to fill this gap, examining existing studies on violence’s epigenetic impact on adult women. The review assessed sample sizes, study validity and gene-specific investigations. Currently, there’s insufficient data for a comprehensive meta-analysis, highlighting a nascent stage in understanding this complex issue. Future research is crucial for deeper insights into epigenetic mechanisms related to violence against women, contributing to improved interventions and support health care systems for affected individuals.
暴力侵害妇女是一个普遍存在的全球性问题,对受害者的福祉产生了深远的影响,而且跨越了文化的界限。除了直接的身体伤害,它还会引发心理健康后果,如创伤后应激障碍(PTSD)。事实上,在暴力事件中经历的创伤会导致表观遗传学的改变,最终导致创伤后应激障碍的发生。有关创伤对表观遗传学影响的研究最初主要集中在退伍军人和灾难幸存者身上,而对暴力侵害妇女行为的研究却十分匮乏。在这篇文章中,我们进行了一项旨在填补这一空白的系统性综述,考察了有关暴力对成年女性表观遗传影响的现有研究。综述评估了样本大小、研究的有效性和特定基因的调查。目前,还没有足够的数据来进行全面的荟萃分析,这凸显了人们对这一复杂问题的认识还处于初级阶段。未来的研究对于深入了解与暴力侵害妇女有关的表观遗传学机制至关重要,有助于改进干预措施和支持受影响个人的医疗保健系统。
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引用次数: 0
Environmental Epigenetics Impact and Artificial Intelligence 环境表观遗传学的影响与人工智能
IF 4.8 Q1 GENETICS & HEREDITY Pub Date : 2024-07-25 DOI: 10.1093/eep/dvae010
Michael K Skinner
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引用次数: 0
To live or let die? Epigenetic adaptations to climate change-a review. 生存还是死亡?表观遗传学对气候变化的适应--综述。
IF 4.8 Q1 GENETICS & HEREDITY Pub Date : 2024-07-04 eCollection Date: 2024-01-01 DOI: 10.1093/eep/dvae009
Jonas Zetzsche, Manon Fallet

Anthropogenic activities are responsible for a wide array of environmental disturbances that threaten biodiversity. Climate change, encompassing temperature increases, ocean acidification, increased salinity, droughts, and floods caused by frequent extreme weather events, represents one of the most significant environmental alterations. These drastic challenges pose ecological constraints, with over a million species expected to disappear in the coming years. Therefore, organisms must adapt or face potential extinctions. Adaptations can occur not only through genetic changes but also through non-genetic mechanisms, which often confer faster acclimatization and wider variability ranges than their genetic counterparts. Among these non-genetic mechanisms are epigenetics defined as the study of molecules and mechanisms that can perpetuate alternative gene activity states in the context of the same DNA sequence. Epigenetics has received increased attention in the past decades, as epigenetic mechanisms are sensitive to a wide array of environmental cues, and epimutations spread faster through populations than genetic mutations. Epimutations can be neutral, deleterious, or adaptative and can be transmitted to subsequent generations, making them crucial factors in both long- and short-term responses to environmental fluctuations, such as climate change. In this review, we compile existing evidence of epigenetic involvement in acclimatization and adaptation to climate change and discuss derived perspectives and remaining challenges in the field of environmental epigenetics. Graphical Abstract.

人类活动造成了一系列威胁生物多样性的环境干扰。气候变化包括温度升高、海洋酸化、盐度增加、干旱以及极端天气事件频发导致的洪水,是最重要的环境变化之一。这些剧烈的挑战对生态造成了限制,预计未来几年将有超过一百万个物种消失。因此,生物必须适应,否则可能面临灭绝。适应不仅可以通过基因变化实现,也可以通过非遗传机制实现,非遗传机制往往比遗传机制更快适应环境,变异范围更广。在这些非遗传机制中,表观遗传学被定义为对分子和机制的研究,这些分子和机制可以在相同的 DNA 序列背景下延续替代的基因活动状态。在过去几十年中,表观遗传学受到越来越多的关注,因为表观遗传学机制对各种环境线索非常敏感,而且表观突变在人群中的传播速度比基因突变更快。表观突变可以是中性的、有害的或适应性的,并且可以传递给后代,这使它们成为对气候变化等环境波动做出长期和短期反应的关键因素。在这篇综述中,我们梳理了表观遗传学参与适应和适应气候变化的现有证据,并讨论了环境表观遗传学领域的衍生观点和仍然存在的挑战。图解摘要。
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引用次数: 0
Epigenetic and gene therapy in human and veterinary medicine. 人类和兽医学中的表观遗传学和基因疗法。
IF 3.8 Q1 Environmental Science Pub Date : 2024-05-10 eCollection Date: 2024-01-01 DOI: 10.1093/eep/dvae006
Eva Bártová

Gene therapy is a focus of interest in both human and veterinary medicine, especially in recent years due to the potential applications of CRISPR/Cas9 technology. Another relatively new approach is that of epigenetic therapy, which involves an intervention based on epigenetic marks, including DNA methylation, histone post-translational modifications, and post-transcription modifications of distinct RNAs. The epigenome results from enzymatic reactions, which regulate gene expression without altering DNA sequences. In contrast to conventional CRISP/Cas9 techniques, the recently established methodology of epigenetic editing mediated by the CRISPR/dCas9 system is designed to target specific genes without causing DNA breaks. Both natural epigenetic processes and epigenetic editing regulate gene expression and thereby contribute to maintaining the balance between physiological functions and pathophysiological states. From this perspective, knowledge of specific epigenetic marks has immense potential in both human and veterinary medicine. For instance, the use of epigenetic drugs (chemical compounds with therapeutic potential affecting the epigenome) seems to be promising for the treatment of cancer, metabolic, and infectious diseases. Also, there is evidence that an epigenetic diet (nutrition-like factors affecting epigenome) should be considered as part of a healthy lifestyle and could contribute to the prevention of pathophysiological processes. In summary, epigenetic-based approaches in human and veterinary medicine have increasing significance in targeting aberrant gene expression associated with various diseases. In this case, CRISPR/dCas9, epigenetic targeting, and some epigenetic nutrition factors could contribute to reversing an abnormal epigenetic landscape to a healthy physiological state.

基因疗法是人类医学和兽医学关注的焦点,尤其是近年来 CRISPR/Cas9 技术的潜在应用。另一种相对较新的方法是表观遗传疗法,它涉及基于表观遗传标记的干预,包括 DNA 甲基化、组蛋白翻译后修饰和不同 RNA 的转录后修饰。表观基因组是酶促反应的结果,它在不改变 DNA 序列的情况下调节基因表达。与传统的 CRISP/Cas9 技术不同,最近确立的由 CRISPR/dCas9 系统介导的表观遗传编辑方法旨在靶向特定基因,而不会造成 DNA 断裂。自然表观遗传过程和表观遗传编辑都能调节基因表达,从而有助于维持生理功能和病理生理状态之间的平衡。从这个角度来看,特定表观遗传标记的知识在人类和兽医领域都具有巨大的潜力。例如,利用表观遗传药物(具有影响表观基因组治疗潜力的化合物)治疗癌症、代谢性疾病和传染性疾病似乎很有前景。此外,有证据表明,表观遗传饮食(影响表观基因组的营养因素)应被视为健康生活方式的一部分,并有助于预防病理生理过程。总之,在人类和兽医领域,以表观遗传为基础的方法在针对与各种疾病相关的异常基因表达方面具有越来越重要的意义。在这种情况下,CRISPR/dCas9、表观遗传靶向和一些表观遗传营养因子可有助于将异常的表观遗传景观逆转到健康的生理状态。
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引用次数: 0
Accelerated aging and altered subclinical response to ozone exposure in young, healthy adults. 年轻、健康的成年人加速衰老和对臭氧暴露亚临床反应的改变。
IF 3.8 Q1 Environmental Science Pub Date : 2024-05-07 eCollection Date: 2024-01-01 DOI: 10.1093/eep/dvae007
William C Weston, Marie Abèle Bind, Wayne E Cascio, Robert B Devlin, David Diaz-Sanchez, Cavin K Ward-Caviness

Ozone exposure induces a myriad of adverse cardiopulmonary outcomes in humans. Although advanced age and chronic disease are factors that may exacerbate a person's negative response to ozone exposure, there are no molecular biomarkers of susceptibility. Here, we examine whether epigenetic age acceleration (EAA) is associated with responsiveness to short-term ozone exposure. Using data from a crossover-controlled exposure study (n = 17), we examined whether EAA, as measured in lung epithelial cells collected 24 h after clean air exposure, modifies the observed effect of ozone on autonomic function, cardiac electrophysiology, hemostasis, pulmonary function, and inflammation. EAA was assessed in lung epithelial cells extracted from bronchoalveolar lavage fluids, using the pan-tissue aging clock. We used two analytic approaches: (i) median regression to estimate the association between EAA and the estimated risk difference for subclinical responses to ozone and (ii) a block randomization approach to estimate EAA's effect modification of subclinical responses. For both approaches, we calculated Fisher-exact P-values, allowing us to bypass large sample size assumptions. In median regression analyses, accelerated epigenetic age modified associations between ozone and heart rate-corrected QT interval (QTc) ([Formula: see text]= 0.12, P-value = 0.007) and between ozone and C-reactive protein ([Formula: see text] = -0.18, P = 0.069). During block randomization, the directions of association remained consistent for QTc and C-reactive protein; however, the P-values weakened. Block randomization also revealed that responsiveness of plasminogen activator inhibitor-1 (PAI-1) to ozone exposure was modified by accelerated epigenetic aging (PAI-1 difference between accelerated aging-defined block groups = -0.54, P-value = 0.039). In conclusion, EAA is a potential biomarker for individuals with increased susceptibility to ozone exposure even among young, healthy adults.

暴露于臭氧会对人体的心肺功能产生各种不良影响。虽然高龄和慢性疾病可能会加剧人对臭氧暴露的不良反应,但目前还没有易感性的分子生物标志物。在这里,我们研究了表观遗传年龄加速(EAA)是否与短期臭氧暴露的反应相关。利用一项交叉对照暴露研究(n = 17)的数据,我们研究了在清洁空气暴露 24 小时后收集的肺上皮细胞中测量的 EAA 是否会改变臭氧对自律神经功能、心脏电生理学、止血、肺功能和炎症的影响。我们使用泛组织老化时钟评估了从支气管肺泡灌洗液中提取的肺上皮细胞中的 EAA。我们采用了两种分析方法:(i) 中位回归法估算 EAA 与臭氧亚临床反应的估计风险差异之间的关联;(ii) 区块随机法估算 EAA 对亚临床反应的影响。对于这两种方法,我们都计算了费雪精确 P 值,从而绕过了大样本量假设。在中位回归分析中,加速表观遗传年龄改变了臭氧与心率校正 QT 间期(QTc)([计算公式:见正文]= 0.12,P 值 = 0.007)以及臭氧与 C 反应蛋白([计算公式:见正文]= -0.18,P = 0.069)之间的关联。在分块随机化过程中,QTc 和 C 反应蛋白的关联方向保持一致,但 P 值减弱。区组随机化还显示,纤溶酶原激活物抑制剂-1(PAI-1)对臭氧暴露的反应性受到加速表观遗传老化的影响(加速老化定义的区组之间的 PAI-1 差异 = -0.54,P 值 = 0.039)。总之,即使在年轻、健康的成年人中,EAA 也是一种潜在的生物标志物,可用于识别对臭氧暴露易感性增加的个体。
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引用次数: 0
Epigenetic processes involved in response to pesticide exposure in human populations: A Systematic Review and Meta-analysis 人类暴露于农药的表观遗传过程:系统回顾与元分析
IF 3.8 Q1 Environmental Science Pub Date : 2024-04-20 DOI: 10.1093/eep/dvae005
Paula Rohr, Karen Shimoyama, Luiza Flávia Veiga Francisco, Marco Antônio de Oliveira, Martins Fidelis dos Santos, Henrique C S Silveira
In recent decades, the use of pesticides in agriculture has increased dramatically. This has resulted in these substances being widely dispersed in the environment, contaminating both exposed workers, communities living near agricultural areas, and via contaminated foodstuffs. In addition to acute poisoning, chronic exposure to pesticides can lead to molecular changes that are becoming better understood. Therefore, the aim of this study was to assess, through a systematic review of the literature, what epigenetic alterations are associated with pesticide exposure. We performed a systematic review and meta-analysis including case-control, cohort, and cross-sectional observational epidemiological studies to verify the epigenetic changes, such as DNA methylation, histone modification, and differential microRNA expression, in humans that had been exposed to any type of pesticide. Articles published between the years 2005 to 2020 were collected. Two different reviewers performed a blind selection of the studies using the Rayyan QCRI software. Post-completion, the data of selected articles were extracted and analyzed. Most of the 28 articles included evaluated global DNA methylation levels, and the most commonly reported epigenetic modification in response to pesticide exposure was global DNA hypomethylation. The meta-analysis revealed a significant negative correlation between Alu methylation levels and β-HCH, pp’-DDT, and pp’-DDE levels. In addition, some specific genes were reported to be hypermethylated in promoter regions, such as CDKN2AIGF2, WRAP53α, and CDH1, while CDKN2B and H19 were hypomethylated due to pesticide exposure. The expression of microRNAs was also altered in response to pesticides, as miR-223, -518d-3p, -597, -517b, and 133b that are associated with many human diseases. Therefore, this study provides evidence that pesticide exposure could lead to epigenetic modifications, possibly altering global and gene-specific methylation levels, epigenome-wide methylation, and micro-RNA differential expression.
近几十年来,农药在农业中的使用量急剧增加。这导致这些物质广泛散布于环境中,污染了接触这些物质的工人、生活在农业区附近的社区,以及受污染的食品。除了急性中毒外,长期接触杀虫剂也会导致分子变化,而人们对这些变化的了解也在不断加深。因此,本研究旨在通过对文献的系统回顾,评估哪些表观遗传学改变与农药暴露有关。我们进行了一项系统性综述和荟萃分析,包括病例对照、队列和横断面观察性流行病学研究,以验证暴露于任何类型杀虫剂的人类的表观遗传学变化,如 DNA 甲基化、组蛋白修饰和微 RNA 表达差异。研究收集了 2005 年至 2020 年间发表的文章。两名不同的审稿人使用 Rayyan QCRI 软件对研究进行了盲选。完成后,对所选文章的数据进行提取和分析。在收录的 28 篇文章中,大部分都对 DNA 整体甲基化水平进行了评估,而最常报道的农药暴露引起的表观遗传学改变是 DNA 整体甲基化水平降低。荟萃分析表明,Alu甲基化水平与β-HCH、pp'-DDT和pp'-DDE水平呈显著负相关。此外,一些特定基因的启动子区域出现了高甲基化,如 CDKN2AIGF2、WRAP53α 和 CDH1,而 CDKN2B 和 H19 则由于农药暴露而出现了低甲基化。此外,microRNAs 的表达也因农药而改变,如 miR-223、-518d-3p、-597、-517b 和 133b,它们与许多人类疾病相关。因此,本研究提供的证据表明,接触农药可能会导致表观遗传修饰,可能会改变整体和基因特异性甲基化水平、表观基因组整体甲基化和微RNA差异表达。
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引用次数: 0
Environmental Epigenetics 2024 Update 环境表观遗传学 2024 年最新进展
IF 3.8 Q1 Environmental Science Pub Date : 2024-03-12 DOI: 10.1093/eep/dvae004
Michael K Skinner
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引用次数: 0
Symposium summary: epigenetic inheritance-impact for biology and society 23-25 August 2023, Zürich, Switzerland. 研讨会摘要:表观遗传--对生物学和社会的影响 2023 年 8 月 23-25 日,瑞士苏黎世。
IF 3.8 Q1 Environmental Science Pub Date : 2024-02-24 eCollection Date: 2024-01-01 DOI: 10.1093/eep/dvae002
Leonard C Steg, Ellen Jaspers, Anar Alshanbayeva, Rodrigo G Arzate-Meija, Maria A Dimitriu, Katharina Gapp, Lola M Kourouma, Kerem Uzel, Isabelle M Mansuy

The possibility that acquired traits can be transmitted across generations has been the subject of intense research in the past decades. This biological process is of major interest to many scientists and has profound implications for biology and society but has complex mechanisms and is therefore challenging to study. Because it involves factors independent from the DNA sequence, this form of heredity is classically referred to as epigenetic inheritance. Many studies have examined how life experiences and various environmental factors can cause phenotypes that are heritable and be manifested in subsequent generations. Recognizing the major importance and complexity of this research, the fourth edition of the Epigenetic Inheritance Symposium Zürich brought together experts from diverse disciplines to address current questions in the field of epigenetic inheritance and present recent findings. The symposium had sessions dedicated to epidemiological evidence and animal models, transmission mechanisms, methodologies and the far-reaching impact on society and evolution. This report summarizes the talks of speakers and describes additional activities offered during the symposium including poster sessions and an art competition on the topic of epigenetic inheritance.

在过去的几十年里,后天性状可以跨代传递的可能性一直是人们热衷研究的课题。这一生物学过程引起了许多科学家的浓厚兴趣,并对生物学和社会产生了深远影响,但其机制复杂,因此研究难度很大。由于它涉及独立于 DNA 序列之外的因素,这种形式的遗传通常被称为表观遗传。许多研究都探讨了生活经历和各种环境因素如何导致表型遗传并在后代中表现出来。认识到这一研究的重要性和复杂性,第四届苏黎世表观遗传研讨会汇聚了来自不同学科的专家,探讨表观遗传领域的当前问题并介绍最新研究成果。研讨会专门讨论了流行病学证据和动物模型、传播机制、方法论以及对社会和进化的深远影响。本报告总结了发言者的发言,并介绍了研讨会期间开展的其他活动,包括以表观遗传为主题的海报展示和艺术竞赛。
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引用次数: 0
Exposure to air pollution is associated with DNA methylation changes in sperm 暴露于空气污染与精子 DNA 甲基化变化有关
IF 3.8 Q1 Environmental Science Pub Date : 2024-02-08 DOI: 10.1093/eep/dvae003
Rose Schrott, Jason I Feinberg, C. Newschaffer, I. Hertz-Picciotto, L. Croen, M. D. Fallin, Heather E. Volk, C. Ladd-Acosta, Andrew P Feinberg
Exposure to air pollutants has been associated with adverse health outcomes in adults and children who were prenatally exposed. In addition to reducing exposure to air pollutants, it is important to identify their biologic targets in order to mitigate the health consequences of exposure. One molecular change associated with prenatal exposure to air pollutants is DNA methylation (DNAm), which has been associated with changes in placenta and cord blood tissues at birth. However, little is known about how air pollution exposure impacts the sperm epigenome, which could provide important insights into mechanism of transmission to offspring. In the present study, we explored whether exposure to particulate matter less than 2.5 microns in diameter (PM2.5), PM10, nitrogen dioxide (NO2), or ozone (O3) was associated with DNAm in sperm contributed by participants in the Early Autism Risk Longitudinal Investigation (EARLI) prospective pregnancy cohort. Air pollution exposure measurements were calculated as the average exposure for each pollutant measured within four weeks prior to the date of sample collection. Using array-based genome-scale methylation analyses we identified 80, 96, 35, and 67 differentially methylated regions (DMRs) significantly associated with PM2.5, PM10, NO2, and O3, respectively. While no DMRs were associated with exposure to all four pollutants, we found that genes overlapping exposure-related DMRs had a shared enrichment for gene ontology biological processes related to neurodevelopment. Together, these data provide compelling support for the hypothesis that paternal exposure to air pollution impacts DNAm in sperm, particularly at regions implicated in neurodevelopment.
接触空气污染物与产前接触空气污染物的成人和儿童的不良健康后果有关。除了减少暴露于空气污染物之外,还必须确定其生物靶标,以减轻暴露对健康的影响。与产前接触空气污染物有关的一种分子变化是 DNA 甲基化(DNAm),它与出生时胎盘和脐带血组织的变化有关。然而,人们对空气污染暴露如何影响精子表观基因组知之甚少,而精子表观基因组可为了解精子遗传给后代的机制提供重要信息。在本研究中,我们探讨了暴露于直径小于2.5微米的颗粒物(PM2.5)、PM10、二氧化氮(NO2)或臭氧(O3)是否与早期自闭症风险纵向调查(EARLI)前瞻性妊娠队列参与者所贡献的精子中的DNAm有关。空气污染暴露测量值按样本采集日期前四周内测量到的每种污染物的平均暴露值计算。通过基于阵列的基因组规模甲基化分析,我们分别发现了与 PM2.5、PM10、NO2 和 O3 显著相关的 80、96、35 和 67 个差异甲基化区域 (DMR)。虽然没有 DMR 与暴露于所有四种污染物有关,但我们发现,与暴露相关的 DMR 重叠的基因在与神经发育有关的基因本体生物学过程中具有共同的富集性。总之,这些数据为父亲暴露于空气污染会影响精子中的DNAm,尤其是与神经发育有关的区域的DNAm的假说提供了有力的支持。
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引用次数: 0
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Environmental Epigenetics
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