Hui Li , Ziyang Li , Kebin Yang , Zeming Lin , Chenglei Zhu , Yan Liu , Zhimin Gao
{"title":"竹子中 ABCG 亚家族的比较分析以及 PeABCG15 在单木质素转运中的潜在功能。","authors":"Hui Li , Ziyang Li , Kebin Yang , Zeming Lin , Chenglei Zhu , Yan Liu , Zhimin Gao","doi":"10.1016/j.plaphy.2024.109278","DOIUrl":null,"url":null,"abstract":"<div><div>Lignin is a principal component of secondary cell wall and plays vital roles in various biological processes. In this study, 68 and 42 members of ABC transporter G subfamily (ABCG) were identified in <em>Bambusa amplexicaulis</em> and <em>Olyra latifolia</em>, which were less than that of 77 in moso bamboo (<em>Phyllostachys edulis</em>). Collinearity analysis showed that <em>ABCG</em>s had undergone robust purifying selection with lower functional differentiation. These ABCGs were clustered into two clades of WBC and PDR. Notably, <em>PeABCG15</em> was highly expressed with the lignification of bamboo shoot. The WGCNA revealed that <em>PeABCG15</em> was co-expressed with eight MYB genes, among which PeMYB203 was able to activate <em>PeABCG15</em> validated by Y1H, DLR, and GUS assays. Furthermore, over-expressing <em>PeABCG15</em> significantly enhanced the content of lignin and the expression levels of monolignol biosynthetic genes in <em>Arabidopsis thaliana</em>, conferring improved tolerance to exogenous coniferyl alcohol. Collectively, our findings elucidated the prospective contribution of PeABCG15 to monolignol transport, providing insights into the lignin biosynthesis mechanism in bamboo.</div></div>","PeriodicalId":20234,"journal":{"name":"Plant Physiology and Biochemistry","volume":"217 ","pages":"Article 109278"},"PeriodicalIF":6.1000,"publicationDate":"2024-11-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Comparison analysis of ABCG subfamily in bamboo and the potential function of PeABCG15 in monolignol transport\",\"authors\":\"Hui Li , Ziyang Li , Kebin Yang , Zeming Lin , Chenglei Zhu , Yan Liu , Zhimin Gao\",\"doi\":\"10.1016/j.plaphy.2024.109278\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>Lignin is a principal component of secondary cell wall and plays vital roles in various biological processes. In this study, 68 and 42 members of ABC transporter G subfamily (ABCG) were identified in <em>Bambusa amplexicaulis</em> and <em>Olyra latifolia</em>, which were less than that of 77 in moso bamboo (<em>Phyllostachys edulis</em>). Collinearity analysis showed that <em>ABCG</em>s had undergone robust purifying selection with lower functional differentiation. These ABCGs were clustered into two clades of WBC and PDR. Notably, <em>PeABCG15</em> was highly expressed with the lignification of bamboo shoot. The WGCNA revealed that <em>PeABCG15</em> was co-expressed with eight MYB genes, among which PeMYB203 was able to activate <em>PeABCG15</em> validated by Y1H, DLR, and GUS assays. Furthermore, over-expressing <em>PeABCG15</em> significantly enhanced the content of lignin and the expression levels of monolignol biosynthetic genes in <em>Arabidopsis thaliana</em>, conferring improved tolerance to exogenous coniferyl alcohol. Collectively, our findings elucidated the prospective contribution of PeABCG15 to monolignol transport, providing insights into the lignin biosynthesis mechanism in bamboo.</div></div>\",\"PeriodicalId\":20234,\"journal\":{\"name\":\"Plant Physiology and Biochemistry\",\"volume\":\"217 \",\"pages\":\"Article 109278\"},\"PeriodicalIF\":6.1000,\"publicationDate\":\"2024-11-06\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Plant Physiology and Biochemistry\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S098194282400946X\",\"RegionNum\":2,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"PLANT SCIENCES\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Plant Physiology and Biochemistry","FirstCategoryId":"99","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S098194282400946X","RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"PLANT SCIENCES","Score":null,"Total":0}
Comparison analysis of ABCG subfamily in bamboo and the potential function of PeABCG15 in monolignol transport
Lignin is a principal component of secondary cell wall and plays vital roles in various biological processes. In this study, 68 and 42 members of ABC transporter G subfamily (ABCG) were identified in Bambusa amplexicaulis and Olyra latifolia, which were less than that of 77 in moso bamboo (Phyllostachys edulis). Collinearity analysis showed that ABCGs had undergone robust purifying selection with lower functional differentiation. These ABCGs were clustered into two clades of WBC and PDR. Notably, PeABCG15 was highly expressed with the lignification of bamboo shoot. The WGCNA revealed that PeABCG15 was co-expressed with eight MYB genes, among which PeMYB203 was able to activate PeABCG15 validated by Y1H, DLR, and GUS assays. Furthermore, over-expressing PeABCG15 significantly enhanced the content of lignin and the expression levels of monolignol biosynthetic genes in Arabidopsis thaliana, conferring improved tolerance to exogenous coniferyl alcohol. Collectively, our findings elucidated the prospective contribution of PeABCG15 to monolignol transport, providing insights into the lignin biosynthesis mechanism in bamboo.
期刊介绍:
Plant Physiology and Biochemistry publishes original theoretical, experimental and technical contributions in the various fields of plant physiology (biochemistry, physiology, structure, genetics, plant-microbe interactions, etc.) at diverse levels of integration (molecular, subcellular, cellular, organ, whole plant, environmental). Opinions expressed in the journal are the sole responsibility of the authors and publication does not imply the editors'' agreement.
Manuscripts describing molecular-genetic and/or gene expression data that are not integrated with biochemical analysis and/or actual measurements of plant physiological processes are not suitable for PPB. Also "Omics" studies (transcriptomics, proteomics, metabolomics, etc.) reporting descriptive analysis without an element of functional validation assays, will not be considered. Similarly, applied agronomic or phytochemical studies that generate no new, fundamental insights in plant physiological and/or biochemical processes are not suitable for publication in PPB.
Plant Physiology and Biochemistry publishes several types of articles: Reviews, Papers and Short Papers. Articles for Reviews are either invited by the editor or proposed by the authors for the editor''s prior agreement. Reviews should not exceed 40 typewritten pages and Short Papers no more than approximately 8 typewritten pages. The fundamental character of Plant Physiology and Biochemistry remains that of a journal for original results.