Carlos Cifuentes-González , William Rojas-Carabali , Germán Mejía-Salgado , Gabriela Flórez-Esparza , Laura Gutiérrez-Sinisterra , Oscar J. Perdomo , Jorge Enrique Gómez-Marín , Rupesh Agrawal , Alejandra de-la-Torre
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Two models were developed on each platform: a binary model (active/inactive OT vs. no OT) and a multiclass model (active OT, inactive OT, and no OT). Datasets were split into 70% for training, 20% for testing, and 10% for validation. Sensitivity, specificity, precision, accuracy, F1-score, the area under the precision-recall curve (AUPRC), and Cohen's Kappa were calculated for each platform and model. An external validation using an open-source image bank was performed.</div></div><div><h3>Results</h3><div>The binary model on AWS showed a sensitivity of 0.97, specificity of 0.98, and AUPRC of 1.00, while the Google Cloud binary model had a sensitivity of 0.82, specificity of 0.91, and AUPRC of 0.91. The multiclass model on AWS achieved an F1 score of 0.88, with Cohen's Kappa of 0.81, while the Google Cloud model reached an F1 score of 0.88, with Cohen's Kappa of 0.82. External validation for Google Cloud achieved an accuracy of 87.5% and 80.3% in the binary and multiclass models, respectively.</div></div><div><h3>Conclusions</h3><div>AutoML is a powerful tool for diagnosing OT and classifying inflammatory activity, potentially guiding diagnosis and treatment decisions.</div></div>","PeriodicalId":100071,"journal":{"name":"AJO International","volume":"1 4","pages":"Article 100079"},"PeriodicalIF":0.0000,"publicationDate":"2024-10-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Is Automated Machine Learning useful for ocular toxoplasmosis identification and classification of the inflammatory activity?\",\"authors\":\"Carlos Cifuentes-González , William Rojas-Carabali , Germán Mejía-Salgado , Gabriela Flórez-Esparza , Laura Gutiérrez-Sinisterra , Oscar J. Perdomo , Jorge Enrique Gómez-Marín , Rupesh Agrawal , Alejandra de-la-Torre\",\"doi\":\"10.1016/j.ajoint.2024.100079\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><h3>Purpose</h3><div>To evaluate the performance of Automated Machine Learning (AutoML) models in diagnosing ocular toxoplasmosis (OT) and classifying its inflammatory activity from fundus photographs.</div></div><div><h3>Design</h3><div>Cross-sectional study.</div></div><div><h3>Methods</h3><div>Fundus photographs from OT patients in two Colombian referral centers and an open-source OT database were classified into active OT, inactive OT, and no OT. Image quality assessment excluded images with artifacts but included blurry images due to vitritis. Photos were uploaded to Amazon Web Services S3 and Google Cloud Bucket. Two models were developed on each platform: a binary model (active/inactive OT vs. no OT) and a multiclass model (active OT, inactive OT, and no OT). Datasets were split into 70% for training, 20% for testing, and 10% for validation. Sensitivity, specificity, precision, accuracy, F1-score, the area under the precision-recall curve (AUPRC), and Cohen's Kappa were calculated for each platform and model. An external validation using an open-source image bank was performed.</div></div><div><h3>Results</h3><div>The binary model on AWS showed a sensitivity of 0.97, specificity of 0.98, and AUPRC of 1.00, while the Google Cloud binary model had a sensitivity of 0.82, specificity of 0.91, and AUPRC of 0.91. The multiclass model on AWS achieved an F1 score of 0.88, with Cohen's Kappa of 0.81, while the Google Cloud model reached an F1 score of 0.88, with Cohen's Kappa of 0.82. External validation for Google Cloud achieved an accuracy of 87.5% and 80.3% in the binary and multiclass models, respectively.</div></div><div><h3>Conclusions</h3><div>AutoML is a powerful tool for diagnosing OT and classifying inflammatory activity, potentially guiding diagnosis and treatment decisions.</div></div>\",\"PeriodicalId\":100071,\"journal\":{\"name\":\"AJO International\",\"volume\":\"1 4\",\"pages\":\"Article 100079\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2024-10-29\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"AJO International\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S2950253524000790\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"AJO International","FirstCategoryId":"1085","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S2950253524000790","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
摘要
目的 评估自动机器学习(AutoML)模型在诊断眼弓形虫病(OT)和根据眼底照片对其炎症活动进行分类方面的性能。方法 将哥伦比亚两家转诊中心的 OT 患者的眼底照片和开放源 OT 数据库分为活动性 OT、非活动性 OT 和无 OT。图像质量评估排除了有伪影的图像,但包括因玻璃体炎导致的模糊图像。照片上传到亚马逊网络服务 S3 和谷歌云桶。每个平台上都开发了两个模型:二元模型(活跃/不活跃OT与无OT)和多类模型(活跃OT、不活跃OT和无OT)。数据集的70%用于训练,20%用于测试,10%用于验证。计算了每个平台和模型的灵敏度、特异度、精确度、准确度、F1-分数、精确度-召回曲线下面积(AUPRC)和科恩卡帕(Cohen's Kappa)。结果AWS上的二元模型灵敏度为0.97,特异度为0.98,AUPRC为1.00,而谷歌云的二元模型灵敏度为0.82,特异度为0.91,AUPRC为0.91。AWS 多分类模型的 F1 得分为 0.88,Cohen's Kappa 为 0.81,而 Google Cloud 模型的 F1 得分为 0.88,Cohen's Kappa 为 0.82。谷歌云的外部验证结果表明,二元模型和多类模型的准确率分别达到了 87.5% 和 80.3%。结论AutoML 是诊断 OT 和炎症活动分类的强大工具,可为诊断和治疗决策提供指导。
Is Automated Machine Learning useful for ocular toxoplasmosis identification and classification of the inflammatory activity?
Purpose
To evaluate the performance of Automated Machine Learning (AutoML) models in diagnosing ocular toxoplasmosis (OT) and classifying its inflammatory activity from fundus photographs.
Design
Cross-sectional study.
Methods
Fundus photographs from OT patients in two Colombian referral centers and an open-source OT database were classified into active OT, inactive OT, and no OT. Image quality assessment excluded images with artifacts but included blurry images due to vitritis. Photos were uploaded to Amazon Web Services S3 and Google Cloud Bucket. Two models were developed on each platform: a binary model (active/inactive OT vs. no OT) and a multiclass model (active OT, inactive OT, and no OT). Datasets were split into 70% for training, 20% for testing, and 10% for validation. Sensitivity, specificity, precision, accuracy, F1-score, the area under the precision-recall curve (AUPRC), and Cohen's Kappa were calculated for each platform and model. An external validation using an open-source image bank was performed.
Results
The binary model on AWS showed a sensitivity of 0.97, specificity of 0.98, and AUPRC of 1.00, while the Google Cloud binary model had a sensitivity of 0.82, specificity of 0.91, and AUPRC of 0.91. The multiclass model on AWS achieved an F1 score of 0.88, with Cohen's Kappa of 0.81, while the Google Cloud model reached an F1 score of 0.88, with Cohen's Kappa of 0.82. External validation for Google Cloud achieved an accuracy of 87.5% and 80.3% in the binary and multiclass models, respectively.
Conclusions
AutoML is a powerful tool for diagnosing OT and classifying inflammatory activity, potentially guiding diagnosis and treatment decisions.