Shicheng Yu, Jiayu Shi, Gaojie Yu, Jin Xu, Yiyao Dong, Yan Lin, Huijia Xie, Jiaming Liu, Jing Sun
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We determined characteristic microbiota through linear discriminant analysis effect size and used the receiver operating characteristic (ROC) curve to assess their predictive value as diagnostic biomarkers.</p><p><strong>Results: </strong>Our results showed significant gut microbial differences among the TIA, AIS, and HC groups. Patients with AIS exhibited higher abundances of <i>Lactobacillus</i> and <i>Streptococcus,</i> along with lower abundances of <i>Butyricicoccaceae</i> and <i>Lachnospiraceae</i>_UCG-004. Further analysis revealed that the abundance of characteristic bacteria, such as <i>Lactobacillus</i> and <i>Streptococcus</i>, was negatively correlated with HDL levels, while <i>Lactobacillus</i> was positively correlated with risk factors such as homocysteine (Hcy). In contrast, the abundance of <i>Lachnospiraceae</i>_UCG-004 was negatively correlated with both Hcy and D-dimer levels. ROC models based on the characteristic bacteria <i>Streptococcus</i> and <i>Lactobacillus</i> effectively distinguished TIA from AIS, yielding areas under the curve of 0.699 and 0.626, respectively.</p><p><strong>Conclusion: </strong>We identified distinct changes in gut bacteria associated with the progression from TIA to AIS and highlighted specific characteristic bacteria as predictive biomarkers. Overall, our findings may promote the development of microbiome-oriented diagnostic methods for the early detection of AIS.</p>","PeriodicalId":12450,"journal":{"name":"Frontiers in Aging Neuroscience","volume":"16 ","pages":"1451968"},"PeriodicalIF":4.1000,"publicationDate":"2024-11-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11582031/pdf/","citationCount":"0","resultStr":"{\"title\":\"Specific gut microbiome signatures predict the risk of acute ischemic stroke.\",\"authors\":\"Shicheng Yu, Jiayu Shi, Gaojie Yu, Jin Xu, Yiyao Dong, Yan Lin, Huijia Xie, Jiaming Liu, Jing Sun\",\"doi\":\"10.3389/fnagi.2024.1451968\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><strong>Introduction: </strong>Numerous studies have reported alterations in the composition of gut microbiota in patients with acute ischemic stroke (AIS), with changes becoming more pronounced as the disease progresses. However, the association between the progression of transient ischemic attack (TIA) and AIS remains unclear. This study aims to elucidate the microbial differences among TIA, AIS, and healthy controls (HC) while exploring the associations between disease progression and gut microbiota.</p><p><strong>Methods: </strong>Fecal samples were collected from acute TIA patients (<i>n</i> = 28), AIS patients (<i>n</i> = 235), and healthy controls (<i>n</i> = 75) and analyzed using 16 s rRNA gene sequencing. We determined characteristic microbiota through linear discriminant analysis effect size and used the receiver operating characteristic (ROC) curve to assess their predictive value as diagnostic biomarkers.</p><p><strong>Results: </strong>Our results showed significant gut microbial differences among the TIA, AIS, and HC groups. Patients with AIS exhibited higher abundances of <i>Lactobacillus</i> and <i>Streptococcus,</i> along with lower abundances of <i>Butyricicoccaceae</i> and <i>Lachnospiraceae</i>_UCG-004. Further analysis revealed that the abundance of characteristic bacteria, such as <i>Lactobacillus</i> and <i>Streptococcus</i>, was negatively correlated with HDL levels, while <i>Lactobacillus</i> was positively correlated with risk factors such as homocysteine (Hcy). In contrast, the abundance of <i>Lachnospiraceae</i>_UCG-004 was negatively correlated with both Hcy and D-dimer levels. ROC models based on the characteristic bacteria <i>Streptococcus</i> and <i>Lactobacillus</i> effectively distinguished TIA from AIS, yielding areas under the curve of 0.699 and 0.626, respectively.</p><p><strong>Conclusion: </strong>We identified distinct changes in gut bacteria associated with the progression from TIA to AIS and highlighted specific characteristic bacteria as predictive biomarkers. 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引用次数: 0
摘要
导言:许多研究报告了急性缺血性脑卒中(AIS)患者肠道微生物群组成的变化,随着病情的发展,这些变化变得更加明显。然而,短暂性脑缺血发作(TIA)的进展与 AIS 之间的关系仍不清楚。本研究旨在阐明 TIA、AIS 和健康对照组(HC)之间的微生物差异,同时探讨疾病进展与肠道微生物群之间的关联:收集急性 TIA 患者(28 人)、AIS 患者(235 人)和健康对照组(75 人)的粪便样本,并使用 16 s rRNA 基因测序法进行分析。我们通过线性判别分析效应大小确定了特征微生物群,并使用接收者操作特征曲线(ROC)评估了它们作为诊断生物标志物的预测价值:结果:我们的研究结果表明,TIA、AIS 和 HC 组之间存在明显的肠道微生物差异。AIS患者的乳酸杆菌和链球菌含量较高,而丁酸球菌科和Lachnospiraceae_UCG-004的含量较低。进一步分析表明,乳酸杆菌和链球菌等特征细菌的丰度与高密度脂蛋白水平呈负相关,而乳酸杆菌与同型半胱氨酸(Hcy)等风险因素呈正相关。相反,Lachnospiraceae_UCG-004 的丰度与 Hcy 和 D-二聚体水平均呈负相关。基于链球菌和乳酸杆菌特征菌的 ROC 模型能有效区分 TIA 和 AIS,曲线下面积分别为 0.699 和 0.626:我们发现肠道细菌的明显变化与 TIA 向 AIS 的进展有关,并强调了特定特征细菌作为预测性生物标志物的作用。总之,我们的研究结果可能会促进以微生物为导向的诊断方法的发展,以便早期检测 AIS。
Specific gut microbiome signatures predict the risk of acute ischemic stroke.
Introduction: Numerous studies have reported alterations in the composition of gut microbiota in patients with acute ischemic stroke (AIS), with changes becoming more pronounced as the disease progresses. However, the association between the progression of transient ischemic attack (TIA) and AIS remains unclear. This study aims to elucidate the microbial differences among TIA, AIS, and healthy controls (HC) while exploring the associations between disease progression and gut microbiota.
Methods: Fecal samples were collected from acute TIA patients (n = 28), AIS patients (n = 235), and healthy controls (n = 75) and analyzed using 16 s rRNA gene sequencing. We determined characteristic microbiota through linear discriminant analysis effect size and used the receiver operating characteristic (ROC) curve to assess their predictive value as diagnostic biomarkers.
Results: Our results showed significant gut microbial differences among the TIA, AIS, and HC groups. Patients with AIS exhibited higher abundances of Lactobacillus and Streptococcus, along with lower abundances of Butyricicoccaceae and Lachnospiraceae_UCG-004. Further analysis revealed that the abundance of characteristic bacteria, such as Lactobacillus and Streptococcus, was negatively correlated with HDL levels, while Lactobacillus was positively correlated with risk factors such as homocysteine (Hcy). In contrast, the abundance of Lachnospiraceae_UCG-004 was negatively correlated with both Hcy and D-dimer levels. ROC models based on the characteristic bacteria Streptococcus and Lactobacillus effectively distinguished TIA from AIS, yielding areas under the curve of 0.699 and 0.626, respectively.
Conclusion: We identified distinct changes in gut bacteria associated with the progression from TIA to AIS and highlighted specific characteristic bacteria as predictive biomarkers. Overall, our findings may promote the development of microbiome-oriented diagnostic methods for the early detection of AIS.
期刊介绍:
Frontiers in Aging Neuroscience is a leading journal in its field, publishing rigorously peer-reviewed research that advances our understanding of the mechanisms of Central Nervous System aging and age-related neural diseases. Specialty Chief Editor Thomas Wisniewski at the New York University School of Medicine is supported by an outstanding Editorial Board of international researchers. This multidisciplinary open-access journal is at the forefront of disseminating and communicating scientific knowledge and impactful discoveries to researchers, academics, clinicians and the public worldwide.