详细评估了一种基于人群的个性化方法来生成合成心肌梗死图像

IF 3.9 3区 计算机科学 Q2 COMPUTER SCIENCE, ARTIFICIAL INTELLIGENCE Pattern Recognition Letters Pub Date : 2024-11-22 DOI:10.1016/j.patrec.2024.11.017
Anastasia Konik , Patrick Clarysse , Nicolas Duchateau
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引用次数: 0

摘要

将生物物理模型个性化为真实数据对于实现真实的模拟或生成相关的合成种群至关重要。然而,其中一些模型涉及随机性,这带来了两个挑战:它们不允许对每个人的数据进行标准个性化,并且它们缺乏优化所需的分析公式。在之前的工作中,我们介绍了一种基于人群的个性化策略,克服了这些挑战,并在简单的二维心肌梗死几何模型上证明了其可行性。该方法包括匹配合成种群和真实种群的分布,通过Kullback-Leibler (KL)散度量化。个性化是通过无梯度算法(CMA-ES)实现的,该算法生成一组候选解,由它们的协方差矩阵表示,其系数不断进化,直到合成数据和真实数据匹配。然而,对于设置和更复杂的数据,这种策略的稳健性没有受到挑战。在这项工作中,我们通过(i)改进的设计,(ii)对个性化过程的关键方面进行全面评估,包括超参数和初始化,以及(iii)对3D数据的应用,专门解决了这些问题。尽管所使用的简单几何模型存在一些局限性,但我们的方法能够捕获真实数据的主要特征,正如123例急性心肌梗死受试者的2D和3D分割晚期钆图像所证明的那样。
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Detailed evaluation of a population-wise personalization approach to generate synthetic myocardial infarct images
Personalization of biophysical models to real data is essential to achieve realistic simulations or generate relevant synthetic populations. However, some of these models involve randomness, which poses two challenges: they do not allow the standard personalization to each individual’s data and they lack an analytical formulation required for optimization. In previous work, we introduced a population-based personalization strategy which overcomes these challenges and demonstrated its feasibility on simple 2D geometrical models of myocardial infarct. The method consists in matching the distributions of the synthetic and real populations, quantified through the Kullback–Leibler (KL) divergence. Personalization is achieved with a gradient-free algorithm (CMA-ES), which generates sets of candidate solutions represented by their covariance matrix, whose coefficients evolve until the synthetic and real data are matched. However, the robustness of this strategy regarding settings and more complex data was not challenged. In this work, we specifically address these points, with (i) an improved design, (ii) a thorough evaluation on crucial aspects of the personalization process, including hyperparameters and initialization, and (iii) the application to 3D data. Despite some limits of the simple geometrical models used, our method is able to capture the main characteristics of the real data, as demonstrated both on 2D and 3D segmented late Gadolinium images of 123 subjects with acute myocardial infarction.
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来源期刊
Pattern Recognition Letters
Pattern Recognition Letters 工程技术-计算机:人工智能
CiteScore
12.40
自引率
5.90%
发文量
287
审稿时长
9.1 months
期刊介绍: Pattern Recognition Letters aims at rapid publication of concise articles of a broad interest in pattern recognition. Subject areas include all the current fields of interest represented by the Technical Committees of the International Association of Pattern Recognition, and other developing themes involving learning and recognition.
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