面向机器学习的放射组学模型在透明细胞肾细胞癌(ccRCC)早期诊断中的应用

IF 1 4区 医学 Q3 MEDICINE, GENERAL & INTERNAL British journal of hospital medicine Pub Date : 2024-11-30 Epub Date: 2024-11-25 DOI:10.12968/hmed.2024.0238
Gao Qiu, Zengzheng Dai, Hua Zhang
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The dataset included 31 cases in the training set (19 males and 12 females, with an average age of 58.1 years) and 13 cases in the validation set (8 males and 5 females, with an average age of 69.6 years). The volume of interest (VOI) was manually delineated, slice by slice, along the tumour's edge in cross-sectional images of ccRCC. Radiomics features were extracted from each region of interest (ROI) using the \"PyRadiomics\" plug-in in 3D Slicer software (version 5.1.0, Massachusetts Institute of Technology and Brigham and Women's Hospital, Boston, MA, USA). Feature selection was performed using Least Absolute Shrinkage and Selection Operator (LASSO) regression analysis, followed by 10-fold cross-validation. The selected radiomics features were then used to construct prediction models based on two different supervised machine learning algorithms: logistic regression and random forest. 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引用次数: 0

摘要

目的/背景透明细胞肾细胞癌(ccRCC)是一种常见的侵袭性肾癌,早期诊断对改善预后和治疗结果至关重要。放射组学利用机器学习技术,在医学成像中提出了一种很有前途的方法,用于早期检测和表征此类疾病。本研究旨在探索基于机器学习的放射组学模型在ccRCC早期诊断中的临床应用。方法从美国癌症影像档案(TCIA)数据库中获取ccRCC患者的病例资料和腹部CT肿瘤图像。其中,训练集31例(男19例,女12例,平均年龄58.1岁),验证集13例(男8例,女5例,平均年龄69.6岁)。在ccRCC的横截面图像中,沿着肿瘤边缘逐片手动划定感兴趣的体积(VOI)。使用3D切片器软件(版本5.1.0,麻省理工学院和布里格姆妇女医院,波士顿,马萨诸塞州,美国)中的“PyRadiomics”插件从每个感兴趣区域(ROI)提取放射组学特征。使用最小绝对收缩和选择算子(LASSO)回归分析进行特征选择,然后进行10倍交叉验证。选择的放射组学特征然后用于构建基于两种不同的监督机器学习算法的预测模型:逻辑回归和随机森林。采用受试者工作特征(ROC)曲线和校正曲线对模型的诊断性能进行评价。最后,将临床数据与放射组学特征相结合,以增强预测模型。结果最终选择44个放射组学特征,根据训练集结果建立预测模型。在两种机器学习模型中,逻辑回归模型表现出更好的诊断性能。考虑到个体放射组学特征(差异方差,联合能源)的模型建立评估。1, JointEntropy。2, MeanAbsoluteDeviation。7, smallareahighgraylevelis .7)和临床数据表明,logistic回归模型稳定,对ccRCC患者具有较强的诊断性能、较好的校准性和临床适用性。当临床数据与模型中的放射组学特征相结合时,曲线下面积(AUC)达到0.969,最佳阈值为-2.290,敏感性和特异性值分别为89.3%和95.2%。校正曲线也证实了logistic回归模型具有较高的校正精度和较大的临床应用价值。结论基于机器学习的放射组学预测模型在透明细胞肾细胞癌(ccRCC)的早期诊断中具有重要价值。
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An Application of Machine-Learning-Oriented Radiomics Model in Clear Cell Renal Cell Carcinoma (ccRCC) Early Diagnosis.

Aims/Background Clear cell renal cell carcinoma (ccRCC) is a common and aggressive form of kidney cancer, where early diagnosis is crucial for improving prognosis and treatment outcomes. Radiomics, which utilizes machine learning techniques, presents a promising approach in medical imaging for the early detection and characterization of such conditions. This study aims to explore the clinical utility of a machine-learning-based radiomics model in the early diagnosis of ccRCC. Methods Case data and abdominal computed tomography (CT) tumour images of patients with ccRCC were obtained from The Cancer Imaging Archive (TCIA) database. The dataset included 31 cases in the training set (19 males and 12 females, with an average age of 58.1 years) and 13 cases in the validation set (8 males and 5 females, with an average age of 69.6 years). The volume of interest (VOI) was manually delineated, slice by slice, along the tumour's edge in cross-sectional images of ccRCC. Radiomics features were extracted from each region of interest (ROI) using the "PyRadiomics" plug-in in 3D Slicer software (version 5.1.0, Massachusetts Institute of Technology and Brigham and Women's Hospital, Boston, MA, USA). Feature selection was performed using Least Absolute Shrinkage and Selection Operator (LASSO) regression analysis, followed by 10-fold cross-validation. The selected radiomics features were then used to construct prediction models based on two different supervised machine learning algorithms: logistic regression and random forest. The diagnostic performance of these models was evaluated using receiver operating characteristic (ROC) curves and calibration curves. Finally, clinical data were integrated with the radiomics features to enhance the prediction model. Results A total of 44 radiomics features were ultimately selected to establish the prediction model based on the training set results. Among the two machine learning models, the logistic regression model demonstrated superior diagnostic performance. An evaluation of model establishment, considering both individual radiomics features (DifferenceVariance, JointEnergy.1, JointEntropy.2, MeanAbsoluteDeviation.7, SmallAreaHighGrayLevelEmphasis.7) and clinical data, indicated that the logistic regression model was stable and exhibited strong diagnostic performance, good calibration, and clinical applicability in patients with ccRCC. When clinical data were combined with radiomics features in the model, the area under the curve (AUC) reached 0.969, with an optimal threshold of -2.290, and sensitivity and specificity values of 89.3% and 95.2%, respectively. The calibration curve also confirmed that the logistic regression model had high calibration accuracy and greater clinical application value. Conclusion This machine-learning-based radiomics prediction model demonstrated significant value in the early diagnosis of clear cell renal cell carcinoma (ccRCC).

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来源期刊
British journal of hospital medicine
British journal of hospital medicine 医学-医学:内科
CiteScore
1.50
自引率
0.00%
发文量
176
审稿时长
4-8 weeks
期刊介绍: British Journal of Hospital Medicine was established in 1966, and is still true to its origins: a monthly, peer-reviewed, multidisciplinary review journal for hospital doctors and doctors in training. The journal publishes an authoritative mix of clinical reviews, education and training updates, quality improvement projects and case reports, and book reviews from recognized leaders in the profession. The Core Training for Doctors section provides clinical information in an easily accessible format for doctors in training. British Journal of Hospital Medicine is an invaluable resource for hospital doctors at all stages of their career. The journal is indexed on Medline, CINAHL, the Sociedad Iberoamericana de Información Científica and Scopus.
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