自交形成了通量平衡下突变等位基因的固定。

IF 3.2 2区 生物学 Q2 EVOLUTIONARY BIOLOGY Genome Biology and Evolution Pub Date : 2024-12-04 DOI:10.1093/gbe/evae261
Yu Xiao, Yan-Wen Lv, Zi-Yun Wang, Chao Wu, Zi-Han He, Xin-Sheng Hu
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引用次数: 0

摘要

在真核生物进化过程中,有性生殖与生命周期中的世代交替是一个重要特征。部分自交可调节配子体阶段清除有害等位基因的效率和孢子体阶段杂合子的掩蔽效应。在此,我们提出了一种新理论,以分析自交如何影响仅在配子体或孢子体阶段或在两个阶段表达的突变等位基因的固定。在一个无限大的种群中,我们分析了一个临界自交率,超过这个临界自交率,突变等位基因就会在不可逆突变和选择效应的平衡下趋于固定。临界自交率随基因在不同阶段的表达而变化。在部分自交的有限种群中,我们应用赖特方法计算了突变等位基因在不可逆突变、选择和漂移效应之间的通量平衡下的固定概率,并将其与扩散模型得出的在选择和漂移效应平衡下的固定概率进行了比较。自交促进了只在配子体阶段表达的有害等位基因的固定,但阻碍了只在孢子体阶段表达的有害等位基因的固定。自交会促进或阻碍在两个阶段表达的有害等位基因的固定,这取决于在一个生命周期中选择的阶段变异是如何发生的。总体结果有助于理解有性生殖植物物种通过部分自交和生命周期中替代世代的共同作用而演化出的适应性策略。
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Selfing Shapes Fixation of a Mutant Allele Under Flux Equilibrium.

Sexual reproduction with alternative generations in a life cycle is an important feature in eukaryotic evolution. Partial selfing can regulate the efficacy of purging deleterious alleles in the gametophyte phase and the masking effect in heterozygotes in the sporophyte phase. Here, we develop a new theory to analyze how selfing shapes fixation of a mutant allele that is expressed in the gametophyte or the sporophyte phase only or in two phases. In an infinitely large population, we analyze a critical selfing rate beyond which the mutant allele tends to be fixed under equilibrium between irreversible mutation and selection effects. The critical selfing rate varies with genes expressed in alternative phases. In a finite population with partial self-fertilization, we apply Wright's method to calculate the fixation probability of the mutant allele under flux equilibrium among irreversible mutation, selection, and drift effects and compare it with the fixation probability derived from diffusion model under equilibrium between selection and drift effects. Selfing facilitates fixation of the deleterious allele expressed in the gametophyte phase only but impedes fixation of the deleterious allele expressed in the sporophyte phase only. Selfing facilitates or impedes fixation of the deleterious allele expressed in two phases, depending upon how phase variation in selection occurs in a life cycle. The overall results help to understand the adaptive strategy that sexual reproductive plant species evolve through the joint effects of partial selfing and alternative generations in a life cycle.

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来源期刊
Genome Biology and Evolution
Genome Biology and Evolution EVOLUTIONARY BIOLOGY-GENETICS & HEREDITY
CiteScore
5.80
自引率
6.10%
发文量
169
审稿时长
1 months
期刊介绍: About the journal Genome Biology and Evolution (GBE) publishes leading original research at the interface between evolutionary biology and genomics. Papers considered for publication report novel evolutionary findings that concern natural genome diversity, population genomics, the structure, function, organisation and expression of genomes, comparative genomics, proteomics, and environmental genomic interactions. Major evolutionary insights from the fields of computational biology, structural biology, developmental biology, and cell biology are also considered, as are theoretical advances in the field of genome evolution. GBE’s scope embraces genome-wide evolutionary investigations at all taxonomic levels and for all forms of life — within populations or across domains. Its aims are to further the understanding of genomes in their evolutionary context and further the understanding of evolution from a genome-wide perspective.
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