Vladyslav Gapyak, Corinna Erika Rentschler, Thomas März, Andreas Weinmann
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In this work, we contribute to the latter class: we propose a Plug-and-Play approach based on a generic zero-shot denoiser with anℓ1-prior.<i>Approach.</i>We validate the reconstruction parameters of the method on a hybrid dataset and compare it with the baseline Tikhonov, ART, DIP and the previous PP-MPI, which is a Plug-and-Play method with denoiser trained on MPI-friendly data.<i>Main results.</i>We derive a Plug-and-Play reconstruction method based on a generic zero-shot denoiser. Addressing (hyper)parameter selection, we perform an extended parameter search on a hybrid validation dataset we produced and apply the derived parameters for reconstruction on the 3D Open MPI Dataset. We offer a quantitative and qualitative evaluation of the zero-shot Plug-and-Play approach on the 3D Open MPI dataset with the validated parameters. Moreover, we show the quality of the approach with different levels of preprocessing of the data.<i>Significance.</i>The proposed method employs a zero-shot denoiser which has not been trained for the MPI reconstruction task and therefore saves the cost for training. 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引用次数: 0
摘要
目的:磁颗粒成像(MPI)是近年来越来越受到关注的一种新兴的医学成像方式。MPI的优点之一是它的高时间分辨率,并且该技术不会使样品暴露于任何类型的电离辐射。& # xD;它是基于磁性纳米粒子对外加磁场的非线性响应。& # xD;根据接收线圈测得的电信号,必须重建粒子浓度。
;由于重建问题的病态性,各种正则化方法已经被提出用于重建,从早期停止方法,通过经典的吉洪诺夫正则化和迭代方法到现代机器学习方法。在这项工作中,我们为后一类做出了贡献:我们提出了一种基于通用零采样去噪器的即插即用方法,该方法具有$\ well ^1$-prior.
;& # xD;方法:我们在混合数据集上验证该方法的重建参数,并将其与基线Tikhonov, ART, DIP和先前的PP-MPI进行比较,这是一种即插即用方法,在mpi友好数据上训练了去噪器。
;& # xD;主要结果:我们推导了一种基于通用零弹去噪的即插即用重构方法。寻址(超)参数选择,我们在我们生成的混合验证数据集上执行扩展参数搜索,并将导出的参数应用于3D Open MPI数据集上的重建。我们对3D Open MPI数据集上的零射即插即用方法进行了定量和定性评估。此外,我们还通过对数据进行不同程度的预处理来展示该方法的质量。
;& # xD;意义:本文方法采用了一种未经过训练的零弹去噪器,用于MPI重构任务,节省了训练成本。此外,它还提供了一种可能应用于未来MPI环境的方法。
Anℓ1-plug-and-play approach for MPI using a zero shot denoiser with evaluation on the 3D open MPI dataset.
Objective.Magnetic particle imaging (MPI) is an emerging medical imaging modality which has gained increasing interest in recent years. Among the benefits of MPI are its high temporal resolution, and that the technique does not expose the specimen to any kind of ionizing radiation. It is based on the non-linear response of magnetic nanoparticles to an applied magnetic field. From the electric signal measured in receive coils, the particle concentration has to be reconstructed. Due to the ill-posedness of the reconstruction problem, various regularization methods have been proposed for reconstruction ranging from early stopping methods, via classical Tikhonov regularization and iterative methods to modern machine learning approaches. In this work, we contribute to the latter class: we propose a Plug-and-Play approach based on a generic zero-shot denoiser with anℓ1-prior.Approach.We validate the reconstruction parameters of the method on a hybrid dataset and compare it with the baseline Tikhonov, ART, DIP and the previous PP-MPI, which is a Plug-and-Play method with denoiser trained on MPI-friendly data.Main results.We derive a Plug-and-Play reconstruction method based on a generic zero-shot denoiser. Addressing (hyper)parameter selection, we perform an extended parameter search on a hybrid validation dataset we produced and apply the derived parameters for reconstruction on the 3D Open MPI Dataset. We offer a quantitative and qualitative evaluation of the zero-shot Plug-and-Play approach on the 3D Open MPI dataset with the validated parameters. Moreover, we show the quality of the approach with different levels of preprocessing of the data.Significance.The proposed method employs a zero-shot denoiser which has not been trained for the MPI reconstruction task and therefore saves the cost for training. Moreover, it offers a method that can be potentially applied in future MPI contexts.
期刊介绍:
The development and application of theoretical, computational and experimental physics to medicine, physiology and biology. Topics covered are: therapy physics (including ionizing and non-ionizing radiation); biomedical imaging (e.g. x-ray, magnetic resonance, ultrasound, optical and nuclear imaging); image-guided interventions; image reconstruction and analysis (including kinetic modelling); artificial intelligence in biomedical physics and analysis; nanoparticles in imaging and therapy; radiobiology; radiation protection and patient dose monitoring; radiation dosimetry