细胞凋亡模型在参数变化和固有噪声方面的鲁棒性。

T Eissing, F Allgöwer, E Bullinger
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引用次数: 82

摘要

对受体诱导的细胞凋亡的直接信号转导通路模型的不同鲁棒性方面进行了分析。细胞凋亡是细胞程序性死亡的一种形式,在多细胞生物体内清除不需要的细胞,以维持细胞繁殖和死亡之间的适当平衡。它的信号通路包括一个激活反馈回路,产生双稳态行为,其中两种稳定状态可以被视为“生”和“死”。固有的稳健性在生物系统中被广泛认可,在凋亡信号传导中具有重要意义,因为它保证了相似条件下相同的细胞命运。首先,反应的随机性质的影响表明抑制反应的作用作为噪声过滤器和证明确定性的方法在进一步的分析进行了评估。其次,通过统计方法评估双稳态阈值相对于参数变化的鲁棒性,表明需要平衡激活回路的前向和后向部分。这些分析还可以区分支持与新的生物学发现一致的模型的模型。参数鲁棒性分析也适用于其他信号转导网络,因为有几个已经显示出双稳态行为。因此,这些方法在系统生物学中有一系列可能的应用,不仅可以测量鲁棒性,还可以用于模型识别。
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Robustness properties of apoptosis models with respect to parameter variations and intrinsic noise.

Analyses of different robustness aspects for models of the direct signal transduction pathway of receptor-induced apoptosis is presented. Apoptosis is a form of programmed cell death, removing unwanted cells within multicellular organisms to maintain a proper balance between cell reproduction and death. Its signalling pathway includes an activation feedback loop that generates bistable behaviour, where the two steady states can be seen as 'life' and 'death'. Inherent robustness, widely recognised in biological systems, is of major importance in apoptosis signalling, as it guarantees the same cell fate for similar conditions. First, the influence of the stochastic nature of reactions indicating a role for inhibition reactions as noise filters and justifying a deterministic approach in the further analyses is evaluated. Second, the robustness of the bistable threshold with respect to parameter changes is evaluated by statistical methods, showing the need to balance both the forward and the back part of the activation loop. These analyses can also discriminate between the models favouring the model consistent with novel biological findings. The parameter robustness analyses are also applicable to other signal transduction networks, as several have been shown to display bistable behaviour. These methods therefore have a range of possible applications in systems biology not only to measure robustness, but also for model discrimination.

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