胆毒素的adp -核糖体精氨酸反应是通过扩散中间体介导的。

Q2 Biochemistry, Genetics and Molecular Biology BMC Biochemistry Pub Date : 2014-12-11 DOI:10.1186/s12858-014-0026-1
Vicky M-H Sung, Chia-Lun Tsai
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引用次数: 3

摘要

背景:胆毒素是一种在非o1 /非o139霍乱弧菌中发现的adp -核糖基转移酶。胆毒素的催化片段被表征为二苯二胺依赖的adp -核糖基转移酶。结果:我们对胆毒素催化片段酶活性的研究表明,adp核糖向毒素的转移主要是通过分子内机制进行的,并导致靠近NAD+结合袋的精氨酸残基优先烷基化。在自反应中,位于催化位点附近和远端位点的多个精氨酸残基可以作为adp -核糖受体。模型酶M8的动力学研究表明,可扩散中间体优先与NAD+结合袋附近的精氨酸残基反应。胆毒素催化片段的adp -核糖精氨酸活性也可以修饰外源底物。胆毒素的自adp核糖基化似乎对外源底物的adp核糖基化具有负调控作用。然而,在内源性和外源性底物存在的情况下,外源性底物的adp核糖基化比内源性底物更有效。结论:通过对自身adp -核糖基化的研究,我们发现了胆毒素催化片段的adp -核糖体精氨酸基活性,该活性是通过扩散中间体介导的。假设的中间体的寿命超过了近亲氧羰基离子的记录和预测寿命。因此,提出了一种可扩散应变形式的NAD+中间体与精氨酸残基以邻近依赖的方式反应。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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ADP-Ribosylargininyl reaction of cholix toxin is mediated through diffusible intermediates.

Background: Cholix toxin is an ADP-ribosyltransferase found in non-O1/non-O139 strains of Vibrio cholera. The catalytic fragment of cholix toxin was characterized as a diphthamide dependent ADP-ribosyltransferase.

Results: Our studies on the enzymatic activity of cholix toxin catalytic fragment show that the transfer of ADP-ribose to toxin takes place by a predominantly intramolecular mechanism and results in the preferential alkylation of arginine residues proximal to the NAD+ binding pocket. Multiple arginine residues, located near the catalytic site and at distal sites, can be the ADP-ribose acceptor in the auto-reaction. Kinetic studies of a model enzyme, M8, showed that a diffusible intermediate preferentially reacted with arginine residues in proximity to the NAD+ binding pocket. ADP-ribosylarginine activity of cholix toxin catalytic fragment could also modify exogenous substrates. Auto-ADP-ribosylation of cholix toxin appears to have negatively regulatory effect on ADP-ribosylation of exogenous substrate. However, at the presence of both endogenous and exogenous substrates, ADP-ribosylation of exogenous substrates occurred more efficiently than that of endogenous substrates.

Conclusions: We discovered an ADP-ribosylargininyl activity of cholix toxin catalytic fragment from our studies in auto-ADP-ribosylation, which is mediated through diffusible intermediates. The lifetime of the hypothetical intermediate exceeds recorded and predicted lifetimes for the cognate oxocarbenium ion. Therefore, a diffusible strained form of NAD+ intermediate was proposed to react with arginine residues in a proximity dependent manner.

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来源期刊
BMC Biochemistry
BMC Biochemistry BIOCHEMISTRY & MOLECULAR BIOLOGY-
CiteScore
4.80
自引率
0.00%
发文量
0
审稿时长
3 months
期刊介绍: BMC Biochemistry is an open access journal publishing original peer-reviewed research articles in all aspects of biochemical processes, including the structure, function and dynamics of metabolic pathways, supramolecular complexes, enzymes, proteins, nucleic acids and small molecular components of organelles, cells and tissues. BMC Biochemistry (ISSN 1471-2091) is indexed/tracked/covered by PubMed, MEDLINE, BIOSIS, CAS, EMBASE, Scopus, Zoological Record, Thomson Reuters (ISI) and Google Scholar.
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