{"title":"瞬时成熟率:一种新颖而紧凑的生物生长曲线模型","authors":"Biman Chakraborty, Amiya Ranjan Bhowmick, Joydev Chattopadhyay, Sabyasachi Bhattacharya","doi":"10.1007/s10867-022-09609-9","DOIUrl":null,"url":null,"abstract":"<div><p>Modeling and analysis of biological growth curves are an age-old study area in which much effort has been dedicated to developing new growth equations. Recent efforts focus on identifying the correct model from a large number of equations. The relative growth rate (RGR), developed by Fisher (1921), has largely been used in the statistical inference of biological growth curve models. It is convenient to express growth equations using RGR, where RGR can be expressed as functions of size or time. Even though RGR is model invariant, it has limitations when it comes to identifying actual growth patterns. By proposing interval-specific rate parameters (ISRPs), Pal et al. (2018) appeared to solve this problem. The ISRP is based on the mathematical structure of the growth equations. Therefore, it is not model invariant. The current effort is to develop a measure of growth that is model invariant like RGR and shares the advantages of ISRP. We propose a new measure of growth, which we call instantaneous maturity rate (IMR). IMR is model invariant, which allows it to distinguish growth patterns more clearly than RGR. IMR is also scale-invariant and can take several forms including increasing, decreasing, constant, sigmoidal, bell-shaped, and bathtub. A wide range of possible IMR shapes makes it possible to identify different growth curves. The estimation procedure of IMR under a stochastic setup has been developed. Statistical properties of empirical IMR estimators have also been investigated in detail. In addition to extensive simulation studies, real data sets have been analyzed to prove the utility of IMR.</p></div>","PeriodicalId":612,"journal":{"name":"Journal of Biological Physics","volume":null,"pages":null},"PeriodicalIF":1.8000,"publicationDate":"2022-07-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://link.springer.com/content/pdf/10.1007/s10867-022-09609-9.pdf","citationCount":"1","resultStr":"{\"title\":\"Instantaneous maturity rate: a novel and compact characterization of biological growth curve models\",\"authors\":\"Biman Chakraborty, Amiya Ranjan Bhowmick, Joydev Chattopadhyay, Sabyasachi Bhattacharya\",\"doi\":\"10.1007/s10867-022-09609-9\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>Modeling and analysis of biological growth curves are an age-old study area in which much effort has been dedicated to developing new growth equations. Recent efforts focus on identifying the correct model from a large number of equations. The relative growth rate (RGR), developed by Fisher (1921), has largely been used in the statistical inference of biological growth curve models. It is convenient to express growth equations using RGR, where RGR can be expressed as functions of size or time. Even though RGR is model invariant, it has limitations when it comes to identifying actual growth patterns. By proposing interval-specific rate parameters (ISRPs), Pal et al. (2018) appeared to solve this problem. The ISRP is based on the mathematical structure of the growth equations. Therefore, it is not model invariant. The current effort is to develop a measure of growth that is model invariant like RGR and shares the advantages of ISRP. We propose a new measure of growth, which we call instantaneous maturity rate (IMR). IMR is model invariant, which allows it to distinguish growth patterns more clearly than RGR. IMR is also scale-invariant and can take several forms including increasing, decreasing, constant, sigmoidal, bell-shaped, and bathtub. A wide range of possible IMR shapes makes it possible to identify different growth curves. The estimation procedure of IMR under a stochastic setup has been developed. Statistical properties of empirical IMR estimators have also been investigated in detail. In addition to extensive simulation studies, real data sets have been analyzed to prove the utility of IMR.</p></div>\",\"PeriodicalId\":612,\"journal\":{\"name\":\"Journal of Biological Physics\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":1.8000,\"publicationDate\":\"2022-07-02\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://link.springer.com/content/pdf/10.1007/s10867-022-09609-9.pdf\",\"citationCount\":\"1\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Biological Physics\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://link.springer.com/article/10.1007/s10867-022-09609-9\",\"RegionNum\":4,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"BIOPHYSICS\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Biological Physics","FirstCategoryId":"99","ListUrlMain":"https://link.springer.com/article/10.1007/s10867-022-09609-9","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"BIOPHYSICS","Score":null,"Total":0}
Instantaneous maturity rate: a novel and compact characterization of biological growth curve models
Modeling and analysis of biological growth curves are an age-old study area in which much effort has been dedicated to developing new growth equations. Recent efforts focus on identifying the correct model from a large number of equations. The relative growth rate (RGR), developed by Fisher (1921), has largely been used in the statistical inference of biological growth curve models. It is convenient to express growth equations using RGR, where RGR can be expressed as functions of size or time. Even though RGR is model invariant, it has limitations when it comes to identifying actual growth patterns. By proposing interval-specific rate parameters (ISRPs), Pal et al. (2018) appeared to solve this problem. The ISRP is based on the mathematical structure of the growth equations. Therefore, it is not model invariant. The current effort is to develop a measure of growth that is model invariant like RGR and shares the advantages of ISRP. We propose a new measure of growth, which we call instantaneous maturity rate (IMR). IMR is model invariant, which allows it to distinguish growth patterns more clearly than RGR. IMR is also scale-invariant and can take several forms including increasing, decreasing, constant, sigmoidal, bell-shaped, and bathtub. A wide range of possible IMR shapes makes it possible to identify different growth curves. The estimation procedure of IMR under a stochastic setup has been developed. Statistical properties of empirical IMR estimators have also been investigated in detail. In addition to extensive simulation studies, real data sets have been analyzed to prove the utility of IMR.
期刊介绍:
Many physicists are turning their attention to domains that were not traditionally part of physics and are applying the sophisticated tools of theoretical, computational and experimental physics to investigate biological processes, systems and materials.
The Journal of Biological Physics provides a medium where this growing community of scientists can publish its results and discuss its aims and methods. It welcomes papers which use the tools of physics in an innovative way to study biological problems, as well as research aimed at providing a better understanding of the physical principles underlying biological processes.