通过尖端的药物计算机研究实现药物发现的自动化:挑战和未来范围。

Smita Singh, Pranjal Kumar Singh, Kapil Sachan, Mukesh Kumar, Poonam Bhardwaj
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引用次数: 0

摘要

硅技术的快速性和高通量特性使其有利于预测大量物质的性质。在药物开发之初,当没有或只有很少的化合物可用时,可以将硅方法用于合成化合物。硅方法可用于杂质或降解产物。通过药物分析(PDA)量化药物和相关物质(RS)也可以通过提供额外的途径来改善药物发现(DD)。PDA未来的潜在应用包括将其与其他方法相结合,对药物和RS进行原位预测。其中一个可能的结果是确定无毒RS的药物潜力。ADME估计、QSAR研究、分子对接、生物活性预测和毒性测试都涉及杂质分析。在进行DD之前,可以在计算机中使用毒性最小的RS。分子对接在将药物推向市场方面的功效仍然存在争议,尽管它得到了改进和改进。生物医学实验室和制药公司尽管经过几十年的发展和改进,但对采用分子对接算法进行药物筛选犹豫不决。尽管“力场”被广泛用于表示分子内部和分子之间施加的能量,但还不可能可靠地预测或计算蛋白质和潜在结合药物之间的结合亲和力。
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Automation of Drug Discovery through Cutting-edge In-silico Research in Pharmaceuticals: Challenges and Future Scope.

The rapidity and high-throughput nature of in silico technologies make them advantageous for predicting the properties of a large array of substances. In silico approaches can be used for compounds intended for synthesis at the beginning of drug development when there is either no or very little compound available. In silico approaches can be used for impurities or degradation products. Quantifying drugs and related substances (RS) with pharmaceutical drug analysis (PDA) can also improve drug discovery (DD) by providing additional avenues to pursue. Potential future applications of PDA include combining it with other methods to make insilico predictions about drugs and RS. One possible outcome of this is a determination of the drug potential of nontoxic RS. ADME estimation, QSAR research, molecular docking, bioactivity prediction, and toxicity testing all involve impurity profiling. Before committing to DD, RS with minimal toxicity can be utilised in silico. The efficacy of molecular docking in getting a medication to market is still debated despite its refinement and improvement. Biomedical labs and pharmaceutical companies were hesitant to adopt molecular docking algorithms for drug screening despite their decades of development and improvement. Despite the widespread use of "force fields" to represent the energy exerted within and between molecules, it has been impossible to reliably predict or compute the binding affinities between proteins and potential binding medications.

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