Ruirui Lv, Mingjie Xu, Shengye Guo, Jingwei Yao, H. A. Sakandar, Jing Guo, Can Zhang, Xia Chen
{"title":"新型甲基营养芽孢杆菌噬菌体BM-P1的特性研究","authors":"Ruirui Lv, Mingjie Xu, Shengye Guo, Jingwei Yao, H. A. Sakandar, Jing Guo, Can Zhang, Xia Chen","doi":"10.1093/fqsafe/fyad016","DOIUrl":null,"url":null,"abstract":"\n Bacillus species have been widely used as probiotics in a number of food products. However, these are vulnerable to bacteriophage infections which poses fermentation failure and eventually result in economic losses. Given this, we designed this study in which bacteriophage of lysogenic Bacillus methylotrophicus, Phage BM-P, was induced successfully, and its biological characteristics and genome information were researched. The obtained results showed that Bacillus species phage belonged to Myoviridae family. The maximum number of infections (MOI) for this phage was 10, with a burst size of 104.48 ± 2.70 counts expressed per milliliter per infective center. Additionally, this phage was temperature and pH sensitive and divalent ions (Ca 2+, Mg 2+) and chloramphenicol did not express significant influence on its adsorption capacity. Genomic analysis revealed that the genome size of Phage BM-P1 was 153,087 bp having 41.94% GC content, including 258 coding sequences (CDs). Further, 52 bacteriophages of Bacillus were classified into two clades by using phylogenetic analysis. Among them, phage BM-P1 with phage VB_BsuM-Goe3 and vB_BveM-Goe7 had highest ANI values, 95.23% and 95.28%, respectively. However, synteny analysis unraveled transpose, deletion and insertion in the genome of BM-P1. Considering this, it could be extrapolated that this phage is a new lysogenic phage. In conclusion, this study furthers the knowledge on the properties of Bacillus methylotrophicus phages and provides seminal insights for designing effective antiphage strategies for fermentation industry.","PeriodicalId":12427,"journal":{"name":"Food Quality and Safety","volume":" ","pages":""},"PeriodicalIF":3.0000,"publicationDate":"2023-02-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"1","resultStr":"{\"title\":\"Characterization of a novel Bacillus methylotrophicus phage BM-P1\",\"authors\":\"Ruirui Lv, Mingjie Xu, Shengye Guo, Jingwei Yao, H. A. Sakandar, Jing Guo, Can Zhang, Xia Chen\",\"doi\":\"10.1093/fqsafe/fyad016\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"\\n Bacillus species have been widely used as probiotics in a number of food products. However, these are vulnerable to bacteriophage infections which poses fermentation failure and eventually result in economic losses. Given this, we designed this study in which bacteriophage of lysogenic Bacillus methylotrophicus, Phage BM-P, was induced successfully, and its biological characteristics and genome information were researched. The obtained results showed that Bacillus species phage belonged to Myoviridae family. The maximum number of infections (MOI) for this phage was 10, with a burst size of 104.48 ± 2.70 counts expressed per milliliter per infective center. Additionally, this phage was temperature and pH sensitive and divalent ions (Ca 2+, Mg 2+) and chloramphenicol did not express significant influence on its adsorption capacity. Genomic analysis revealed that the genome size of Phage BM-P1 was 153,087 bp having 41.94% GC content, including 258 coding sequences (CDs). Further, 52 bacteriophages of Bacillus were classified into two clades by using phylogenetic analysis. Among them, phage BM-P1 with phage VB_BsuM-Goe3 and vB_BveM-Goe7 had highest ANI values, 95.23% and 95.28%, respectively. However, synteny analysis unraveled transpose, deletion and insertion in the genome of BM-P1. Considering this, it could be extrapolated that this phage is a new lysogenic phage. In conclusion, this study furthers the knowledge on the properties of Bacillus methylotrophicus phages and provides seminal insights for designing effective antiphage strategies for fermentation industry.\",\"PeriodicalId\":12427,\"journal\":{\"name\":\"Food Quality and Safety\",\"volume\":\" \",\"pages\":\"\"},\"PeriodicalIF\":3.0000,\"publicationDate\":\"2023-02-22\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"1\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Food Quality and Safety\",\"FirstCategoryId\":\"97\",\"ListUrlMain\":\"https://doi.org/10.1093/fqsafe/fyad016\",\"RegionNum\":3,\"RegionCategory\":\"农林科学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"FOOD SCIENCE & TECHNOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Food Quality and Safety","FirstCategoryId":"97","ListUrlMain":"https://doi.org/10.1093/fqsafe/fyad016","RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"FOOD SCIENCE & TECHNOLOGY","Score":null,"Total":0}
Characterization of a novel Bacillus methylotrophicus phage BM-P1
Bacillus species have been widely used as probiotics in a number of food products. However, these are vulnerable to bacteriophage infections which poses fermentation failure and eventually result in economic losses. Given this, we designed this study in which bacteriophage of lysogenic Bacillus methylotrophicus, Phage BM-P, was induced successfully, and its biological characteristics and genome information were researched. The obtained results showed that Bacillus species phage belonged to Myoviridae family. The maximum number of infections (MOI) for this phage was 10, with a burst size of 104.48 ± 2.70 counts expressed per milliliter per infective center. Additionally, this phage was temperature and pH sensitive and divalent ions (Ca 2+, Mg 2+) and chloramphenicol did not express significant influence on its adsorption capacity. Genomic analysis revealed that the genome size of Phage BM-P1 was 153,087 bp having 41.94% GC content, including 258 coding sequences (CDs). Further, 52 bacteriophages of Bacillus were classified into two clades by using phylogenetic analysis. Among them, phage BM-P1 with phage VB_BsuM-Goe3 and vB_BveM-Goe7 had highest ANI values, 95.23% and 95.28%, respectively. However, synteny analysis unraveled transpose, deletion and insertion in the genome of BM-P1. Considering this, it could be extrapolated that this phage is a new lysogenic phage. In conclusion, this study furthers the knowledge on the properties of Bacillus methylotrophicus phages and provides seminal insights for designing effective antiphage strategies for fermentation industry.
期刊介绍:
Food quality and safety are the main targets of investigation in food production. Therefore, reliable paths to detect, identify, quantify, characterize and monitor quality and safety issues occurring in food are of great interest.
Food Quality and Safety is an open access, international, peer-reviewed journal providing a platform to highlight emerging and innovative science and technology in the agro-food field, publishing up-to-date research in the areas of food quality and safety, food nutrition and human health. It promotes food and health equity which will consequently promote public health and combat diseases.
The journal is an effective channel of communication between food scientists, nutritionists, public health professionals, food producers, food marketers, policy makers, governmental and non-governmental agencies, and others concerned with the food safety, nutrition and public health dimensions.
The journal accepts original research articles, review papers, technical reports, case studies, conference reports, and book reviews articles.