基于图像的表型组学L系统模型:以玉米和油菜为例

IF 2.6 Q1 AGRONOMY in silico Plants Pub Date : 2021-12-10 DOI:10.1093/insilicoplants/diab039
M. Cieslak, N. Khan, Pascal Ferraro, R. Soolanayakanahally, S. J. Robinson, I. Parkin, Ian McQuillan, P. Prusinkiewicz
{"title":"基于图像的表型组学L系统模型:以玉米和油菜为例","authors":"M. Cieslak, N. Khan, Pascal Ferraro, R. Soolanayakanahally, S. J. Robinson, I. Parkin, Ian McQuillan, P. Prusinkiewicz","doi":"10.1093/insilicoplants/diab039","DOIUrl":null,"url":null,"abstract":"\n Artificial neural networks that recognize and quantify relevant aspects of crop plants show great promise in image-based phenomics, but their training requires many annotated images. The acquisition of these images is comparatively simple, but their manual annotation is time-consuming. Realistic plant models, which can be annotated automatically, thus present an attractive alternative to real plant images for training purposes. Here we show how such models can be constructed and calibrated quickly, using maize and canola as case studies.","PeriodicalId":36138,"journal":{"name":"in silico Plants","volume":" ","pages":""},"PeriodicalIF":2.6000,"publicationDate":"2021-12-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"7","resultStr":"{\"title\":\"L-system models for image-based phenomics: case studies of maize and canola\",\"authors\":\"M. Cieslak, N. Khan, Pascal Ferraro, R. Soolanayakanahally, S. J. Robinson, I. Parkin, Ian McQuillan, P. Prusinkiewicz\",\"doi\":\"10.1093/insilicoplants/diab039\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"\\n Artificial neural networks that recognize and quantify relevant aspects of crop plants show great promise in image-based phenomics, but their training requires many annotated images. The acquisition of these images is comparatively simple, but their manual annotation is time-consuming. Realistic plant models, which can be annotated automatically, thus present an attractive alternative to real plant images for training purposes. Here we show how such models can be constructed and calibrated quickly, using maize and canola as case studies.\",\"PeriodicalId\":36138,\"journal\":{\"name\":\"in silico Plants\",\"volume\":\" \",\"pages\":\"\"},\"PeriodicalIF\":2.6000,\"publicationDate\":\"2021-12-10\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"7\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"in silico Plants\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1093/insilicoplants/diab039\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"AGRONOMY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"in silico Plants","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1093/insilicoplants/diab039","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"AGRONOMY","Score":null,"Total":0}
引用次数: 7

摘要

识别和量化作物相关方面的人工神经网络在基于图像的表型组学中显示出巨大的前景,但它们的训练需要许多带注释的图像。这些图像的获取相对简单,但手工标注耗时较长。逼真的植物模型,可以自动注释,因此为训练目的提供了一个有吸引力的替代真实植物图像。本文以玉米和油菜为例,展示了如何快速构建和校准这些模型。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
L-system models for image-based phenomics: case studies of maize and canola
Artificial neural networks that recognize and quantify relevant aspects of crop plants show great promise in image-based phenomics, but their training requires many annotated images. The acquisition of these images is comparatively simple, but their manual annotation is time-consuming. Realistic plant models, which can be annotated automatically, thus present an attractive alternative to real plant images for training purposes. Here we show how such models can be constructed and calibrated quickly, using maize and canola as case studies.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
in silico Plants
in silico Plants Agricultural and Biological Sciences-Agronomy and Crop Science
CiteScore
4.70
自引率
9.70%
发文量
21
审稿时长
10 weeks
期刊最新文献
Model-based inference of a dual role for HOPS in regulating guard cell vacuole fusion. Playing a crop simulation model using symbols and sounds: the ‘mandala’ A Scalable Pipeline to Create Synthetic Datasets from Functional-Structural Plant Models for Deep Learning In a PICKLE: A gold standard entity and relation corpus for the molecular plant sciences A comparison of empirical and mechanistic models for wheat yield prediction at field level in Moroccan rainfed areas
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1