非回文限制性内切酶最多两个切割位点的DNA剪接系统

IF 0.3 Q4 MATHEMATICS Matematika Pub Date : 2019-07-31 DOI:10.11113/MATEMATIKA.V35.N2.1108
Nurul Izzaty Ismail, Fong Wan Heng, N. Sarmin
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引用次数: 0

摘要

剪接系统的建模是通过在连接酶和限制性酶存在的情况下切割和重组DNA分子的过程来模拟的,这些酶在生物学上被称为内皮脱氧核糖核酸酶。由DNA剪接系统产生的分子被称为剪接语言。回文是一个字符串序列,前后读相同。以前已经对限制性内切酶的回文序列DNA剪接系统中剪接语言的泛化进行了研究。在本研究中,使用Head剪接系统的符号来确定由具有一个非回文限制酶的DNA剪接系统产生的剪接语言。第一和第二定理分别给出了涉及一个非回文限制酶的一个和两个非重叠切割位点的DNA剪接系统的剪接语言的推广,并用直接法和归纳法证明了这两个定理。第一个定理的结果显示了一个平凡的字符串,它是最初的DNA分子;而第二定理确定了由来自相应DNA剪接系统的一组所得DNA分子组成的剪接语言。
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DNA Splicing Systems with at Most Two Cutting Sites of a Non-Palindromic Restriction Enzyme
The modelling of splicing systems is simulated by the process of cleaving and recombining DNA molecules with the presence of a ligase and restriction enzymes which are biologically called as endodeoxyribonucleases.  The molecules resulting from DNA splicing systems are known as splicing languages. Palindrome is a sequence of strings that reads the same forward and backward.  Research on generalisations of splicing languages in DNA splicing system involving palindromic sequences for restriction enzymes has been done previously. In this research, the splicing languages resulting from DNA splicing systems with one non-palindromic restriction enzyme are determined using the notation from Head splicing system.  The generalisations of splicing languages for DNA splicing systems involving one and two non-overlapping cutting sites of one non-palindromic restriction enzyme are presented in the first and second theorems, respectively, which are proved using direct and induction methods.  The result from the first theorem shows a trivial string which is the initial DNA molecule; while the second theorem determines a splicing language consisting of a set of resulting DNA molecules from the respective DNA splicing system.
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来源期刊
Matematika
Matematika MATHEMATICS-
自引率
25.00%
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0
审稿时长
24 weeks
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