COVID-19的季节性行为及其半凝集素样病毒激增的罪魁祸首

4区 生物学 Q2 Medicine Methods in Microbiology Pub Date : 2022-01-01 Epub Date: 2021-11-15 DOI:10.1016/bs.mim.2021.10.002
Kelsey Caetano-Anollés, Nicolas Hernandez, Fizza Mughal, Tre Tomaszewski, Gustavo Caetano-Anollés
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引用次数: 0

摘要

季节性是许多病毒性疾病的特性。与其他 "冬季 "RNA病毒一样,COVID-19的病原体SARS-CoV-2引起的感染似乎也表现出明显的季节性变化。在此,我们将讨论 COVID-19 的季节性行为、新出现的病毒表型、病毒进化以及病毒变异情况如何影响疾病的季节性特征。我们提出,传染病传播(特别是 COVID-19 的传播)背后的多种季节性驱动因素存在 "权衡 "关系,可以在受环境、生理和行为调节的 "病毒持久性三角 "框架内进行更好的描述。这种 "权衡 "关系的存在是因为一种性状的增加不可能导致另一种性状的减少。我们还提出,病毒的分子成分可以作为环境和生理的传感器,并可能代表季节性的分子罪魁祸首。我们寻找了能够受环境调节的灵活蛋白质结构,并在 SARS-CoV-2 穗状病毒蛋白的 N 端结构域中发现了一种类似于 galectin 的折叠结构,这是一种潜在的候选结构。通过追踪该结构中突变的发生率,我们发现了一种由突变爆发驱动的半球依赖性季节模式。我们认为,类似于galectin的结构是突变的频繁目标,因为它能帮助病毒逃避或调节宿主的生理反应,从而进一步传播和生存。现在,N 端结构域的柔性区域应成为通过疫苗和疗法缓解病毒传播的重点,也是预测和做出明智的公共卫生决策的重点。
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The seasonal behaviour of COVID-19 and its galectin-like culprit of the viral spike.

Seasonal behaviour is an attribute of many viral diseases. Like other 'winter' RNA viruses, infections caused by the causative agent of COVID-19, SARS-CoV-2, appear to exhibit significant seasonal changes. Here we discuss the seasonal behaviour of COVID-19, emerging viral phenotypes, viral evolution, and how the mutational landscape of the virus affects the seasonal attributes of the disease. We propose that the multiple seasonal drivers behind infectious disease spread (and the spread of COVID-19 specifically) are in 'trade-off' relationships and can be better described within a framework of a 'triangle of viral persistence' modulated by the environment, physiology, and behaviour. This 'trade-off' exists as one trait cannot increase without a decrease in another. We also propose that molecular components of the virus can act as sensors of environment and physiology, and could represent molecular culprits of seasonality. We searched for flexible protein structures capable of being modulated by the environment and identified a galectin-like fold within the N-terminal domain of the spike protein of SARS-CoV-2 as a potential candidate. Tracking the prevalence of mutations in this structure resulted in the identification of a hemisphere-dependent seasonal pattern driven by mutational bursts. We propose that the galectin-like structure is a frequent target of mutations because it helps the virus evade or modulate the physiological responses of the host to further its spread and survival. The flexible regions of the N-terminal domain should now become a focus for mitigation through vaccines and therapeutics and for prediction and informed public health decision making.

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来源期刊
Methods in Microbiology
Methods in Microbiology 生物-生化研究方法
CiteScore
1.50
自引率
0.00%
发文量
15
审稿时长
>12 weeks
期刊最新文献
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