Chih-Yi Hu, Hsien-Tsung Tsai, Chui-Feng Chiu, Tsung-Chen Su, Nguyen Hoang Khoi Le, Shu-Dan Yeh
{"title":"基于ssr的台湾茶叶品种分子诊断及其在茶叶品种成分鉴定中的应用","authors":"Chih-Yi Hu, Hsien-Tsung Tsai, Chui-Feng Chiu, Tsung-Chen Su, Nguyen Hoang Khoi Le, Shu-Dan Yeh","doi":"10.38212/2224-6614.3465","DOIUrl":null,"url":null,"abstract":"<p><p>Taiwan specialty teas are produced with distinct manufacturing processes from specific cultivars of tea plants in Camellia. Due to the widespread transplantation of Taiwan tea cultivars and active international trading of tea materials, an accurate and reliable method to identify tea cultivars at the border is vital to protect the image of premium Taiwan specialty teas. In this study, we introduced the Taiwan Tea Variety Identification (TTVID) kit, a capillary electrophoresis-based multiplex PCR assay consisting of 12 simple sequence repeat (SSR) markers. A database composing these 12 SSR loci genotypes in 144 cultivars was established for marker assessment and molecular diagnosis. The power of discrimination on a locus ranged from 0.7894 to 0.966 and the combined match probability of 12 SSR loci was 5.34e-14. Cultivar pairwise comparison among 144 accessions showed that over 90.6% of the pairs had differential genotypes on at least 10 of 12 SSR loci. Further assessment showed that the TTVID kit could unambiguously recognize the cultivars mixed in the loose-leaf teas processed with various degrees of fermentation and roasting. Our results suggested that this TTVID kit effectively identified cultivar composition in loose-leaf tea and is helpful for border control in preventing adulteration and fraud in the Taiwan tea market.</p>","PeriodicalId":358,"journal":{"name":"Journal of Food and Drug Analysis","volume":" ","pages":"446-457"},"PeriodicalIF":2.6000,"publicationDate":"2023-08-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10629914/pdf/","citationCount":"0","resultStr":"{\"title\":\"SSR-based molecular diagnosis for Taiwan tea cultivars and its application in identifying cultivar composition of the processed tea.\",\"authors\":\"Chih-Yi Hu, Hsien-Tsung Tsai, Chui-Feng Chiu, Tsung-Chen Su, Nguyen Hoang Khoi Le, Shu-Dan Yeh\",\"doi\":\"10.38212/2224-6614.3465\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Taiwan specialty teas are produced with distinct manufacturing processes from specific cultivars of tea plants in Camellia. Due to the widespread transplantation of Taiwan tea cultivars and active international trading of tea materials, an accurate and reliable method to identify tea cultivars at the border is vital to protect the image of premium Taiwan specialty teas. In this study, we introduced the Taiwan Tea Variety Identification (TTVID) kit, a capillary electrophoresis-based multiplex PCR assay consisting of 12 simple sequence repeat (SSR) markers. A database composing these 12 SSR loci genotypes in 144 cultivars was established for marker assessment and molecular diagnosis. The power of discrimination on a locus ranged from 0.7894 to 0.966 and the combined match probability of 12 SSR loci was 5.34e-14. Cultivar pairwise comparison among 144 accessions showed that over 90.6% of the pairs had differential genotypes on at least 10 of 12 SSR loci. Further assessment showed that the TTVID kit could unambiguously recognize the cultivars mixed in the loose-leaf teas processed with various degrees of fermentation and roasting. Our results suggested that this TTVID kit effectively identified cultivar composition in loose-leaf tea and is helpful for border control in preventing adulteration and fraud in the Taiwan tea market.</p>\",\"PeriodicalId\":358,\"journal\":{\"name\":\"Journal of Food and Drug Analysis\",\"volume\":\" \",\"pages\":\"446-457\"},\"PeriodicalIF\":2.6000,\"publicationDate\":\"2023-08-31\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10629914/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Food and Drug Analysis\",\"FirstCategoryId\":\"97\",\"ListUrlMain\":\"https://doi.org/10.38212/2224-6614.3465\",\"RegionNum\":3,\"RegionCategory\":\"农林科学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"FOOD SCIENCE & TECHNOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Food and Drug Analysis","FirstCategoryId":"97","ListUrlMain":"https://doi.org/10.38212/2224-6614.3465","RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"FOOD SCIENCE & TECHNOLOGY","Score":null,"Total":0}
SSR-based molecular diagnosis for Taiwan tea cultivars and its application in identifying cultivar composition of the processed tea.
Taiwan specialty teas are produced with distinct manufacturing processes from specific cultivars of tea plants in Camellia. Due to the widespread transplantation of Taiwan tea cultivars and active international trading of tea materials, an accurate and reliable method to identify tea cultivars at the border is vital to protect the image of premium Taiwan specialty teas. In this study, we introduced the Taiwan Tea Variety Identification (TTVID) kit, a capillary electrophoresis-based multiplex PCR assay consisting of 12 simple sequence repeat (SSR) markers. A database composing these 12 SSR loci genotypes in 144 cultivars was established for marker assessment and molecular diagnosis. The power of discrimination on a locus ranged from 0.7894 to 0.966 and the combined match probability of 12 SSR loci was 5.34e-14. Cultivar pairwise comparison among 144 accessions showed that over 90.6% of the pairs had differential genotypes on at least 10 of 12 SSR loci. Further assessment showed that the TTVID kit could unambiguously recognize the cultivars mixed in the loose-leaf teas processed with various degrees of fermentation and roasting. Our results suggested that this TTVID kit effectively identified cultivar composition in loose-leaf tea and is helpful for border control in preventing adulteration and fraud in the Taiwan tea market.
期刊介绍:
The journal aims to provide an international platform for scientists, researchers and academicians to promote, share and discuss new findings, current issues, and developments in the different areas of food and drug analysis.
The scope of the Journal includes analytical methodologies and biological activities in relation to food, drugs, cosmetics and traditional Chinese medicine, as well as related disciplines of topical interest to public health professionals.