小麦对F型绿蝽抗性的独特基因Gb1的基因组定位

IF 6 1区 农林科学 Q1 AGRONOMY Crop Journal Pub Date : 2023-10-01 DOI:10.1016/j.cj.2023.02.002
Xiangyang Xu , Genqiao Li , Guihua Bai , Brett F. Carver , Ruolin Bian , Amy Bernardo , J. Scott Armstrong
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引用次数: 1

摘要

绿虫(Schizaphis graminum,Rondani)是许多小麦种植区的一种严重害虫,在美国的谷物作物中已经侵扰了一个多世纪。新的绿虫生物型的不断出现使得探索所有可用于管理这种害虫的绿虫抗性来源变得至关重要。Gb1是DS28A中的一个隐性绿虫抗性基因,对几种经济上重要的绿虫生物型具有抗性,是唯一一个对绿虫生物类型F具有抗性的基因。使用通过测序进行基因分型(GBS)产生的单核苷酸多态性(SNP)标记对相应的F2群体进行选择性基因分型,从而鉴定出Gb1的候选基因组区域。因此,先前在该区域定位的SSR标记被用于对整个F2群体进行基因分型,并且竞争性等位基因特异性PCR(KASP)标记也从目标区域的SNPs中开发出来。Gb1被放置在1A染色体短臂的末端区域,其位置在衍生自杂交DS28A×PI 697274的第二个群体中得到证实。来自两个映射群体的组合数据分析将Gb1界定为<;1AS上13328200和14241426bp之间的1Mb间隔。
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Genomic location of Gb1, a unique gene conferring wheat resistance to greenbug biotype F

Greenbug (Schizaphis graminum, Rondani) is a serious insect pest in many wheat growing regions and has been infesting cereal crops in the USA for over a century. Continuous occurrence of new greenbug biotypes makes it essential to explore all greenbug resistant sources available to manage this pest. Gb1, a recessive greenbug resistance gene in DS28A, confers resistance to several economically important greenbug biotypes and is the only gene found to be resistant to greenbug biotype F. A set of 174 F2:3 lines from the cross DS28A × Custer was evaluated for resistance to greenbug biotype F in 2020 and 2022. Selective genotyping of the corresponding F2 population using single nucleotide polymorphism (SNP) markers generated by genotyping-by-sequencing (GBS) led to the identification of a candidate genomic region for Gb1. Thus, SSR markers previously mapped in this region were used to genotype the entire F2 population, and kompetitive allele specific PCR (KASP) markers were also developed from SNPs in the target region. Gb1 was placed in the terminal region of the short arm of chromosome 1A, and its location was confirmed in a second population derived from the cross DS28A × PI 697274. The combined data analysis from the two mapping populations delimited Gb1 to a < 1 Mb interval between 13,328,200 and 14,241,426 bp on 1AS.

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来源期刊
Crop Journal
Crop Journal Agricultural and Biological Sciences-Agronomy and Crop Science
CiteScore
9.90
自引率
3.00%
发文量
638
审稿时长
41 days
期刊介绍: The major aims of The Crop Journal are to report recent progresses in crop sciences including crop genetics, breeding, agronomy, crop physiology, germplasm resources, grain chemistry, grain storage and processing, crop management practices, crop biotechnology, and biomathematics. The regular columns of the journal are Original Research Articles, Reviews, and Research Notes. The strict peer-review procedure will guarantee the academic level and raise the reputation of the journal. The readership of the journal is for crop science researchers, students of agricultural colleges and universities, and persons with similar academic levels.
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