为 oomycete 系统发育之谜增添一块缺失的拼图:Rhipidium interruptum(Rhipidiaceae)的位置。

Fungal systematics and evolution Pub Date : 2023-06-01 Epub Date: 2023-06-14 DOI:10.3114/fuse.2023.11.08
I Tsai, M Thines
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引用次数: 0

摘要

卵菌纲是一类真菌类生物,在系统发育上包括早期分化的品系,大多为全缘真菌,以及两个冠菌纲,即 Peronosporomycetes 和 Saprolegniomycetes,其中包括许多研究得很清楚的动植物病原体。不过,还有一个研究较少的类群--鞭毛目(Rhipidiales),其在冠层卵菌纲中的位置并不明确。它包括几个分类群,具有复杂的无性和生殖周期以及结构组织,可以说是卵菌中最复杂的。尽管鞭毛真菌的形态非常复杂,而且在面对生长速度更快的食腐性卵菌纲和真菌时也表现出了顽强的生命力,但到目前为止,人们对鞭毛真菌的了解还很有限,因为最复杂的成员不容易培养,即使是有针对性的培养方法也是如此。这也导致了该目序列数据的不足,在引入的 7 个属中,只有两个最不复杂的属,即无患子属和沙利镰刀菌属提供了序列数据。在本研究中,使用各种水果基质进行了原位诱捕,并检查了从水体中自然脱落的树枝或水果。通过这些努力,我们获得了中断蝇(Rhipidium interruptum)这一物种,并使用杨树(黑杨)树枝作为基质进行了粗培养,从而进一步记录了无性繁殖和有性繁殖。这样就可以进行系统发育和详细的形态学研究,并对该物种进行表型鉴定。基于 cox2 和 nrLSU 序列的系统进化分析表明,Rhipidium 是无患子属的姊妹属。形态学研究支持 R. interruptum 与 R. continuum 的同种性,而 R. continuum 又可能与 R. americanum 同种。尽管还需要进一步的研究才能将关于 Rhipidiales 的零散缺失的知识碎片整合在一起,从而揭示出更完整的卵菌进化图景,但我们希望当前的研究能成为该类群未来研究的基石。引用:Tsai I, Thines M (2023).真菌系统学与进化》(Fungal Systematics and Evolution),第 1 卷,2007 年。Fungal Systematics and Evolution 11: 95-108. doi: 10.3114/fuse.2023.11.08.
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Adding a missing piece to the puzzle of oomycete phylogeny: the placement of Rhipidium interruptum (Rhipidiaceae).

Oomycetes are a group of fungus-like organisms, which phylogenetically comprise early diverging lineages that are mostly holocarpic, and two crown classes, the Peronosporomycetes and Saprolegniomycetes, including many well-investigated pathogens of plants and animals. However, there is a poorly studied group, the Rhipidiales, which placement amongst the crown oomycetes is ambiguous. It accommodates several taxa with a sophisticated vegetative and reproductive cycle, as well as structural organisation, that is arguably the most complex in the oomycete lineage. Despite the remarkable morphological complexity and their notable perseverance in the face of faster-growing saprotrophic oomycetes and fungi, the knowledge on Rhipidiales is limited to date, as the most complex members are not easily cultured, even by targeted approaches. This also leads to inadequate sequence data for the order, which was sourced from only the two least complex out of seven introduced genera, i.e. Sapromyces and Salispina. In the present study, ex-situ baiting was done using various fruit substrates, and naturally-shed twigs or fruits acquired from water bodies were examined. As a result of these efforts, the species Rhipidium interruptum was obtained and gross cultivation was accomplished using poplar (Populus nigra) twigs as substrate, which allowed further documentation of both asexual and sexual reproduction. This enabled phylogenetic and detailed morphological study, as well as an epitypification of the species. Phylogenetic analyses based on cox2 and nrLSU sequences revealed Rhipidium as the sister genus of Sapromyces. The morphological studies done support a conspecificity of R. interruptum and R. continuum, which might in turn be conspecific with R. americanum. Though several further studies will be required to fit the scattered missing pieces of knowledge on Rhipidiales together revealing a more complete picture of oomycete evolution, we hope that the current study can serve as a cornerstone for future investigations in the group. Citation: Tsai I, Thines M (2023). Adding a missing piece to the puzzle of oomycete phylogeny: the placement of Rhipidium interruptum (Rhipidiaceae). Fungal Systematics and Evolution 11: 95-108. doi: 10.3114/fuse.2023.11.08.

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