指根(Boesenbergia pandurata)治疗肥胖症的活性化合物:计算机方法

A. Yuniarto, A. Aji, A. Ramadhani, G. Permatasari
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摘要

肥胖每年在世界范围内变得越来越普遍。几项研究已经证明草药对预防肥胖有效。本研究利用生物信息学的方法,深入研究了虎檀的活性成分,揭示了它们的作用机制。研究方法包括活性化合物选择、QSAR分析、网络分析、分子对接、ADME预测等。QSAR分析预测活性化合物与血管保护、抗高胆固醇血症、抗炎、自由基清除、脂质代谢调节和TNF表达抑制等理论活性的相关性大于0.5。此外,网络分析结果表明,5种化合物(pinocembrin、cardamonin、flavokawain B、flavokawain C和tectochrysin)与RPS6KB1有直接相互作用。与对照配体(FS9)相比,匹诺诺匹林的结合亲和力最高,为-7.26 kcal/mol。ADME预测结果表明,这5种化合物均无毒且具有良好的吸收率。综上所述,芥蓝的活性成分可能通过抑制促炎细胞因子、调节脂质代谢以及与抗氧化剂相关的多种机制改善代谢综合征,尤其是肥胖。
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Active compounds of fingerroot (Boesenbergia pandurata) for obesity treatment: in silico approaches
Obesity has become increasingly prevalent worldwide each year. Several studies have proven that herbs are effective in preventing obesity. The research delved into the active compounds of Boesenbergia pandurata to reveal their mechanisms of action by utilizing bioinformatics approaches. The research methods included active compounds selection, QSAR analysis, networking analysis, molecular docking, and ADME prediction. The QSAR analysis predicted that the active compounds were correlated with some theoretical activities with more than 0.5 probability, namely vasoprotective, anti-hypercholesterolemic, anti-inflammatory, free radical scavenging, and as a lipid metabolism regulator and TNF expression inhibitor. Furthermore, the results of the networking analysis showed that five compounds (pinocembrin, cardamonin, flavokawain B, flavokawain C, and tectochrysin) had direct interactions with RPS6KB1. Pinocembrin exhibited the highest binding affinityof -7.26 kcal/mol, although not as strong as that of the control ligand (FS9). The ADME prediction indicated that the five compounds were non-toxic and had excellent absorption. It can be concluded that the active compounds of B. pandurata have the ability to improve metabolic syndrome, especially obesity, in silico through several mechanisms, such as suppression of pro-inflammatory cytokine, regulation of lipid metabolism, and those associated with antioxidants.
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