寻找骨肉瘤双作用多靶点抑制剂的计算方法。

IF 1.4 Q3 Pharmacology, Toxicology and Pharmaceutics Journal of Advanced Pharmaceutical Technology & Research Pub Date : 2023-01-01 Epub Date: 2023-01-20 DOI:10.4103/japtr.japtr_541_22
Maria Apriliani Gani, Ahmad Dzulikri Nurhan, Bulan Rhea Kaulika Hadinar Putri, Andhi Suyatno, Shakil Ahmed Khan, Chrismawan Ardianto, Fedik Abdul Rantam, Junaidi Khotib
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摘要

骨肉瘤是一种常见的原发性恶性骨肿瘤,通常表现在生命的第二个十年。本研究旨在鉴定可能作为骨肉瘤多靶点抑制剂的成骨化合物。这项研究是对9种美国食品药品监督管理局批准的具有成骨特性的化合物与骨肉瘤关键膜蛋白的分子对接研究。所使用的配体为雷洛昔芬、辛伐他汀、地塞米松、利塞膦酸盐、依班膦酸盐,唑来膦酸、抗坏血酸、阿仑膦酸盐和β-甘油磷酸,而所使用的靶蛋白为RET、成纤维细胞生长因子受体1、KIT、PDGFRA、VEGFR1和VEGFR2。Chem3D版本15.0.0.106用于配体制备,AutoDockTools版本1.5.6用于蛋白质制备,而分子对接使用AutoDock Vina进行。雷洛昔芬、辛伐他汀和地塞米松对靶蛋白的结合活性最低。雷洛昔芬的结合亲和力为-8.4至-10.0 kcal mol-1,辛伐他汀为-8.3至-9.2 kcal mol-2,地塞米松为-6.9至-9.1 kcal mol-3。大多数类型的相互作用是疏水性的,然后是氢键。目前的研究表明,雷洛昔芬、辛伐他汀和地塞米松有可能作为骨肉瘤的多靶点抑制剂,并具有诱导骨重塑的能力。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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Computational approach in searching for dual action multitarget inhibitors for osteosarcoma.

Osteosarcoma is a common primary malignant bone tumor that typically manifests in the second decade of life. This study aimed to identify osteogenic compounds that potentially serve as multitarget inhibitors for osteosarcoma. The study was a molecular docking study of nine Food and Drug Administration-approved compounds with osteogenic properties to the key membrane proteins of osteosarcoma. The ligands used were raloxifene, simvastatin, dexamethasone, risedronate, ibandronate, zoledronic acid, ascorbic acid, alendronate, and β-glycerophosphate, whereas the target proteins used were RET, fibroblast growth factor receptor 1, KIT, PDGFRA, VEGFR1, and VEGFR2. Chem3D version 15.0.0.106 was used for ligand preparation, and AutoDockTools version 1.5.6 was used for protein preparation, whereas molecular docking was conducted using AutoDock Vina. Raloxifene, simvastatin, and dexamethasone had the lowest binding activity to the target proteins. The binding affinity of raloxifene was from -8.4 to -10.0 kcal mol-1, that of simvastatin was -8.3 to -9.2 kcal mol-1, whereas dexamethasone ranged from -6.9 to -9.1 kcal mol-1. Most types of interactions were hydrophobically followed by hydrogen bonding. The current study suggests that raloxifene, simvastatin, and dexamethasone have the potential to act as multitarget inhibitors for osteosarcoma with the ability to induce bone remodeling.

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来源期刊
CiteScore
2.00
自引率
7.10%
发文量
44
审稿时长
20 weeks
期刊介绍: Journal of Advanced Pharmaceutical Technology & Research (JAPTR) is an Official Publication of Society of Pharmaceutical Education & Research™. It is an international journal published Quarterly. Journal of Advanced Pharmaceutical Technology & Research (JAPTR) is available in online and print version. It is a peer reviewed journal aiming to communicate high quality original research work, reviews, short communications, case report, Ethics Forum, Education Forum and Letter to editor that contribute significantly to further the scientific knowledge related to the field of Pharmacy i.e. Pharmaceutics, Pharmacology, Pharmacognosy, Pharmaceutical Chemistry. Articles with timely interest and newer research concepts will be given more preference.
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