使用自动机器学习管道比较阿尔茨海默病分类的淀粉样蛋白成像归一化策略。

Boning Tong, Shannon L Risacher, Jingxuan Bao, Yanbo Feng, Xinkai Wang, Marylyn D Ritchie, Jason H Moore, Ryan Urbanowicz, Andrew J Saykin, Li Shen
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引用次数: 0

摘要

淀粉样蛋白成像通过检测区域淀粉样蛋白斑块密度,已广泛应用于阿尔茨海默病(AD)的诊断和生物标志物的发现。淀粉样蛋白成像必须通过参考区域进行归一化处理,以减少噪声和伪影。为了探索最佳归一化策略,我们采用了自动机器学习(AutoML)管道 STREAMLINE 来进行 AD 诊断二元分类,并使用 13 种机器学习模型进行基于包型的特征重要性分析。在这项工作中,我们进行了一项比较研究,以评估三种淀粉样蛋白成像测量方法的预测性能和生物标记物发现能力,包括一种原始测量方法和两种使用两个参考区域(即整个小脑和复合参考区域)的归一化测量方法。我们的 AutoML 结果表明,复合参考区域归一化数据集能产生更高的平衡准确度,并能根据特征重要性分级识别出更多的 AD 相关区域。
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Comparing Amyloid Imaging Normalization Strategies for Alzheimer's Disease Classification using an Automated Machine Learning Pipeline.

Amyloid imaging has been widely used in Alzheimer's disease (AD) diagnosis and biomarker discovery through detecting the regional amyloid plaque density. It is essential to be normalized by a reference region to reduce noise and artifacts. To explore an optimal normalization strategy, we employ an automated machine learning (AutoML) pipeline, STREAMLINE, to conduct the AD diagnosis binary classification and perform permutation-based feature importance analysis with thirteen machine learning models. In this work, we perform a comparative study to evaluate the prediction performance and biomarker discovery capability of three amyloid imaging measures, including one original measure and two normalized measures using two reference regions (i.e., the whole cerebellum and the composite reference region). Our AutoML results indicate that the composite reference region normalization dataset yields a higher balanced accuracy, and identifies more AD-related regions based on the fractioned feature importance ranking.

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