Screening of Phytochemicals from Derris indica for Antimycobacterial Potential using Molecular Docking Analysis

Harsh Kashyap, Vanshika Makol, Manisha Khatri
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Abstract

Mycobacterium tuberculosis, responsible for causing tuberculosis (TB) in humans, continues to pose a significant worldwide threat, causing extensive fatalities as the most prominent bacterial disease and urgent attention is required to develop novel anti-TB drugs. Throughout the history of medicine, natural remedies have consistently held a vital position, offering valuable references for the development of new drugs. The present study aimed to screen phytoconstituents of Derris indica as inhibitors of protein kinase B, an enzyme critical for cell wall synthesis of Mtb using in silico approach. Molecular docking of phytochemical library of D. indica against PknB was carried out to explore binding interactions, alongwith in silico toxicity prediction of the phytoconstituents. The shortlisted phytoconstituents demonstrated favorable pharmacokinetic characteristics suitable for oral absorption and met the criteria set by Lipinski's rule of five, indicating their potential as drug candidates. Six compounds (Pongaflavanol, Kaempferol, Quercetin, Karanjin, Ovaliflavanone A and Pongaglabrone) demonstrated significant binding interactions with the minimum binding energy ranging from -9.71 kcal/mol to -8.68 kcal/mol as compared with conventional synthetic drugs. These selected phytoconstituents may serve as valuable starting points for the future advancement of effective and safe antimycobacterial drug.
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利用分子对接分析筛选稻谷植物化学物质的抑菌潜力
导致人类结核病的结核分枝杆菌继续在世界范围内构成重大威胁,作为最突出的细菌性疾病,它造成了广泛的死亡,需要紧急关注开发新的抗结核药物。在整个医学史上,自然疗法一直占据着重要的地位,为新药的开发提供了宝贵的参考。本研究旨在筛选稻瘟病菌的植物成分作为蛋白激酶B的抑制剂,蛋白激酶B是结核分枝杆菌细胞壁合成的关键酶。对籼稻抗PknB的植物化学文库进行分子对接,探索其结合作用,并对植物成分进行硅毒性预测。候选植物成分表现出良好的药代动力学特性,适合口服吸收,符合利平斯基五法则的标准,表明其候选药物潜力。与常规合成药物相比,6种化合物(pongflavanol、山奈酚、槲皮素、Karanjin、Ovaliflavanone A和Pongaglabrone)表现出显著的结合相互作用,最小结合能在-9.71 kcal/mol ~ -8.68 kcal/mol之间。这些筛选出的植物成分为今后开发有效、安全的抗真菌药物提供了有价值的起点。
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