Gene cluster cehBDEF is responsible for the conversion of 1,2-dihydroxynaphthalene to salicylate in Rhizobium sp. strain X9

IF 4.1 2区 环境科学与生态学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY International Biodeterioration & Biodegradation Pub Date : 2024-05-29 DOI:10.1016/j.ibiod.2024.105818
Yidong Zhou , Hongfei Liu , Zhenyang Shen , Wenbin Chang , Baiyang Zhang , Chunli Xia , Mingliang Zhang , Qing Hong
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Abstract

Rhizobium sp. strain X9 was able to degrade 1-naphthol via 1,2-dihydroxynaphthalene (1,2-DHN), salicylate and gentisate. We have identified the two component hydroxylase gene cehC1C2 (responsible for the conversion of 1-naphthol to 1,2-DHN) and genes cehG, cehH, and cehI involved in CoA dependent hydroxylation reaction (conversion of salicylate to gentisate). However, the other genes involved in the degradation pathway (from 1,2-DHN to salicylate) have not been identified yet. In this study, the cehBDEF gene cluster organized in the same operon was identified to be involved in the degradation of 1,2-DHN to salicylate. CehB was a novel 1,2-DHN dioxygenase that catalyzes 1,2-DHN to 2-hydroxychromene-2-carboxylate (HCCA), sharing only 28.2% amino acid identity with catechol 2,3-dioxygenase (P31003). CehD, cehE and CehF were conserved with the previously reported corresponding enzymes in 1-naphthol degradation (identity >60%). They are responsible for the successive conversion of HCCA to salicylate. The current study fills in the gap of the genes involved in the 1-naphthol degradation in strain X9.

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基因簇cehBDEF负责将根瘤菌X9菌株中的1,2-二羟基萘转化为水杨酸盐
根瘤菌 X9 菌株能够通过 1,2-二羟基萘(1,2-DHN)、水杨酸盐和龙胆酸盐降解 1-萘酚。我们确定了羟化酶的两个组成基因 cehC1C2(负责将 1-萘酚转化为 1,2-DHN)以及参与 CoA 依赖性羟化反应(将水杨酸转化为龙胆酸)的基因 cehG、cehH 和 cehI。然而,参与降解途径(从 1,2-DHN到水杨酸盐)的其他基因尚未确定。本研究发现,组织在同一操作子中的 cehBDEF 基因簇参与了 1,2-DHN 到水杨酸盐的降解过程。CehB是一种新型的1,2-DHN二氧合酶,可催化1,2-DHN转化为2-羟基苯并吡喃-2-羧酸(HCCA),与儿茶酚2,3-二氧合酶(P31003)只有28.2%的氨基酸相同性。CehD、cehE 和 CehF 与之前报道的 1-萘酚降解中的相应酶存在保守性(同一性为 60%)。它们负责将 HCCA 连续转化为水杨酸。本研究填补了菌株 X9 中参与 1-萘酚降解基因的空白。
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来源期刊
CiteScore
9.60
自引率
10.40%
发文量
107
审稿时长
21 days
期刊介绍: International Biodeterioration and Biodegradation publishes original research papers and reviews on the biological causes of deterioration or degradation.
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