Incorporation of phenylcarbonyl groups in the sidechain: A tool to induce ordered assembly of peptides on surfaces

IF 1.8 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Journal of Peptide Science Pub Date : 2024-06-19 DOI:10.1002/psc.3629
Mrinal Kalita, Khushboo Yadav, Archana Archana, Thiruvancheril G. Gopakumar, Prema G. Vasudev, Ramesh Ramapanicker
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Abstract

The possibility of introducing various functionalities on peptides with relative ease allows them to be used for molecular applications. However, oligopeptides prepared entirely from proteinogenic amino acids seldom assemble as ordered structures on surfaces. Therefore, sidechain modifications of peptides that can increase the intermolecular interactions without altering the constitution of a given peptide become an attractive route to self-assembling them on surfaces. We find that replacing phenylalanine residues with unusual amino acids that have phenylcarbonyl sidechains in oligopeptides increases the formation of ordered self-assembly on a highly ordered pyrolytic graphite surface. Peptides containing the modified amino acids provided extended long-range ordered assemblies, while the analogous peptides containing phenylalanine residues failed to form long-range assemblies. X-ray crystallographic analysis of the bulk structures of these peptides and the analogous peptides containing phenylalanine residues reveal that such modifications do not alter the secondary structure in crystals. It also reveals that the secondary hydrogen bonding interaction through phenylcarbonyl sidechains facilitates extended growth of the peptides on graphite.

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在侧链中加入苯基羰基:诱导多肽在表面上有序组装的工具。
在肽上引入各种功能相对容易,因此可用于分子应用。然而,完全由蛋白质氨基酸制备的寡肽很少能在表面上组装成有序的结构。因此,对肽进行侧链修饰,在不改变特定肽结构的情况下增加分子间的相互作用,成为在表面上自组装肽的一条有吸引力的途径。我们发现,用具有苯基羰基侧链的不常见氨基酸取代低聚肽中的苯丙氨酸残基,可增加在高度有序的热解石墨表面上形成有序自组装。含有改性氨基酸的肽可形成扩展的长程有序组装,而含有苯丙氨酸残基的类似肽则无法形成长程组装。对这些肽和含有苯丙氨酸残基的类似肽的主体结构进行的 X 射线晶体学分析表明,这种修饰不会改变晶体中的二级结构。分析还显示,通过苯基羰基侧链产生的二级氢键相互作用促进了多肽在石墨上的延伸生长。
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来源期刊
Journal of Peptide Science
Journal of Peptide Science 生物-分析化学
CiteScore
3.40
自引率
4.80%
发文量
83
审稿时长
1.7 months
期刊介绍: The official Journal of the European Peptide Society EPS The Journal of Peptide Science is a cooperative venture of John Wiley & Sons, Ltd and the European Peptide Society, undertaken for the advancement of international peptide science by the publication of original research results and reviews. The Journal of Peptide Science publishes three types of articles: Research Articles, Rapid Communications and Reviews. The scope of the Journal embraces the whole range of peptide chemistry and biology: the isolation, characterisation, synthesis properties (chemical, physical, conformational, pharmacological, endocrine and immunological) and applications of natural peptides; studies of their analogues, including peptidomimetics; peptide antibiotics and other peptide-derived complex natural products; peptide and peptide-related drug design and development; peptide materials and nanomaterials science; combinatorial peptide research; the chemical synthesis of proteins; and methodological advances in all these areas. The spectrum of interests is well illustrated by the published proceedings of the regular international Symposia of the European, American, Japanese, Australian, Chinese and Indian Peptide Societies.
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