EVADyR: A new dynamic resampling algorithm for auto-tuning noisy High Performance Computing systems

IF 3.1 3区 计算机科学 Q2 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS Journal of Computational Science Pub Date : 2024-11-14 DOI:10.1016/j.jocs.2024.102468
Sophie Robert-Hayek , Soraya Zertal , Philippe Couvée
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Abstract

Black-box auto-tuning methods have been proven to be efficient for tuning configurable computer hardware, including those encountered within the High Performance Computing (HPC) ecosystem. However, because of the shared nature of HPC clusters and the complexity of the software and hardware stacks, the measurement of the performance function can be tainted by noise during the tuning process, which can reduce and sometimes prevent the benefit of the tuning approach. A usual choice for performing the tuning in spite of these interference is to add a resampling step at each iteration to reduce uncertainty, but this approach can be time-consuming and must be done carefully. In this paper, we propose a new resampling and filtering algorithm called EVADyR (Efficient Value Aware Dynamic Resampling). Compared to the state of the art, it finds a better exploration versus exploitation trade-off by resampling only promising configuration and increases the level of confidence around the suggested solution as the tuning process advances. This algorithm was able to tune efficiently two I/O accelerators highly sensitive to interference, in two different scenarios. Compared to Standard Error Dynamic Resampling (SEDR), a state of the art noise reduction strategy, we show that EVADyR is able to reduce the distance to the optimum by 93.5% and 24.7% for the two I/O accelerators respectively, as well as speed-up the experiment duration by 45.8% and 58.1% because less iterations are needed to reach the found optimum. Our results prove the importance of using noise reduction strategies whenever tuning systems running in production.
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EVADyR:用于自动调整噪声高性能计算系统的新型动态重采样算法
黑盒自动调整方法已被证明可有效调整可配置计算机硬件,包括高性能计算(HPC)生态系统中的硬件。然而,由于高性能计算集群的共享性以及软件和硬件堆栈的复杂性,性能函数的测量在调谐过程中可能会受到噪声的影响,这可能会降低调谐方法的效益,有时甚至无法实现。要在这些干扰下进行调整,通常的选择是在每次迭代时增加一个重采样步骤,以减少不确定性,但这种方法可能很耗时,而且必须谨慎操作。在本文中,我们提出了一种名为 EVADyR(Efficient Value Aware Dynamic Resampling,高效值感知动态重采样)的新型重采样和过滤算法。与现有技术相比,该算法通过只对有希望的配置进行重采样,找到了更好的探索与利用之间的权衡,并随着调整过程的推进,提高了对建议解决方案的置信度。该算法能够在两种不同的场景中有效调整两个对干扰高度敏感的 I/O 加速器。与最先进的降噪策略标准误差动态重采样(SEDR)相比,我们发现 EVADyR 能够将两个 I/O 加速器的最佳值距离分别缩短 93.5% 和 24.7%,并将实验持续时间分别加快 45.8% 和 58.1%,因为达到最佳值所需的迭代次数更少。我们的结果证明,在调整生产中运行的系统时,使用降噪策略非常重要。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Journal of Computational Science
Journal of Computational Science COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS-COMPUTER SCIENCE, THEORY & METHODS
CiteScore
5.50
自引率
3.00%
发文量
227
审稿时长
41 days
期刊介绍: Computational Science is a rapidly growing multi- and interdisciplinary field that uses advanced computing and data analysis to understand and solve complex problems. It has reached a level of predictive capability that now firmly complements the traditional pillars of experimentation and theory. The recent advances in experimental techniques such as detectors, on-line sensor networks and high-resolution imaging techniques, have opened up new windows into physical and biological processes at many levels of detail. The resulting data explosion allows for detailed data driven modeling and simulation. This new discipline in science combines computational thinking, modern computational methods, devices and collateral technologies to address problems far beyond the scope of traditional numerical methods. Computational science typically unifies three distinct elements: • Modeling, Algorithms and Simulations (e.g. numerical and non-numerical, discrete and continuous); • Software developed to solve science (e.g., biological, physical, and social), engineering, medicine, and humanities problems; • Computer and information science that develops and optimizes the advanced system hardware, software, networking, and data management components (e.g. problem solving environments).
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