A multiscale model of immune surveillance in micrometastases gives insights on cancer patient digital twins.

IF 3.5 2区 生物学 Q1 MATHEMATICAL & COMPUTATIONAL BIOLOGY NPJ Systems Biology and Applications Pub Date : 2024-12-04 DOI:10.1038/s41540-024-00472-z
Heber L Rocha, Boris Aguilar, Michael Getz, Ilya Shmulevich, Paul Macklin
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Abstract

Metastasis is the leading cause of death in patients with cancer, driving considerable scientific and clinical interest in immunosurveillance of micrometastases. We investigated this process by creating a multiscale mathematical model to study the interactions between the immune system and the progression of micrometastases in general epithelial tissue. We analyzed the parameter space of the model using high-throughput computing resources to generate over 100,000 virtual patient trajectories. We demonstrated that the model could recapitulate a wide variety of virtual patient trajectories, including uncontrolled growth, partial response, and complete immune response to tumor growth. We classified the virtual patients and identified key patient parameters with the greatest effect on the simulated immunosurveillance. We highlight the lessons derived from this analysis and their impact on the nascent field of cancer patient digital twins (CPDTs). While CPDTs could enable clinicians to systematically dissect the complexity of cancer in each individual patient and inform treatment choices, our work shows that key challenges remain before we can reach this vision. In particular, we show that there remain considerable uncertainties in immune responses, unreliable patient stratification, and unpredictable personalized treatment. Nonetheless, we also show that in spite of these challenges, patient-specific models suggest strategies to increase control of clinically undetectable micrometastases even without complete parameter certainty.

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微转移免疫监测的多尺度模型为癌症患者数字双胞胎提供了见解。
转移是癌症患者死亡的主要原因,微转移的免疫监测引起了相当大的科学和临床兴趣。我们通过创建一个多尺度数学模型来研究这一过程,以研究免疫系统与一般上皮组织微转移进展之间的相互作用。我们使用高通量计算资源分析模型的参数空间,生成超过100,000个虚拟患者轨迹。我们证明该模型可以概括各种虚拟患者轨迹,包括不受控制的生长,部分反应和肿瘤生长的完全免疫反应。我们对虚拟患者进行了分类,并确定了对模拟免疫监测影响最大的关键患者参数。我们强调从这一分析中得出的经验教训及其对新兴领域癌症患者数字双胞胎(cpdt)的影响。虽然cpdt可以使临床医生系统地剖析每个患者癌症的复杂性,并为治疗选择提供信息,但我们的工作表明,在我们实现这一愿景之前,仍存在关键挑战。特别是,我们表明在免疫反应、不可靠的患者分层和不可预测的个性化治疗方面仍然存在相当大的不确定性。尽管如此,我们也表明,尽管存在这些挑战,患者特异性模型提出了一些策略,可以增加对临床无法检测到的微转移的控制,即使没有完全的参数确定性。
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来源期刊
NPJ Systems Biology and Applications
NPJ Systems Biology and Applications Mathematics-Applied Mathematics
CiteScore
5.80
自引率
0.00%
发文量
46
审稿时长
8 weeks
期刊介绍: npj Systems Biology and Applications is an online Open Access journal dedicated to publishing the premier research that takes a systems-oriented approach. The journal aims to provide a forum for the presentation of articles that help define this nascent field, as well as those that apply the advances to wider fields. We encourage studies that integrate, or aid the integration of, data, analyses and insight from molecules to organisms and broader systems. Important areas of interest include not only fundamental biological systems and drug discovery, but also applications to health, medical practice and implementation, big data, biotechnology, food science, human behaviour, broader biological systems and industrial applications of systems biology. We encourage all approaches, including network biology, application of control theory to biological systems, computational modelling and analysis, comprehensive and/or high-content measurements, theoretical, analytical and computational studies of system-level properties of biological systems and computational/software/data platforms enabling such studies.
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