Stable Cox regression for survival analysis under distribution shifts

IF 18.8 1区 计算机科学 Q1 COMPUTER SCIENCE, ARTIFICIAL INTELLIGENCE Nature Machine Intelligence Pub Date : 2024-12-13 DOI:10.1038/s42256-024-00932-5
Shaohua Fan, Renzhe Xu, Qian Dong, Yue He, Cheng Chang, Peng Cui
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Abstract

Survival analysis aims to estimate the impact of covariates on the expected time until an event occurs, which is broadly utilized in disciplines such as life sciences and healthcare, substantially influencing decision-making and improving survival outcomes. Existing methods, usually assuming similar training and testing distributions, nevertheless face challenges with real-world varying data sources, creating unpredictable shifts that undermine their reliability. This urgently necessitates that survival analysis methods should utilize stable features across diverse cohorts for predictions, rather than relying on spurious correlations. To this end, we propose a stable Cox model with theoretical guarantees to identify stable variables, which jointly optimizes an independence-driven sample reweighting module and a weighted Cox regression model. Through extensive evaluation on simulated and real-world omics and clinical data, stable Cox not only shows strong generalization ability across diverse independent test sets but also stratifies the subtype of patients significantly with the identified biomarker panels. Survival prediction models used in healthcare usually assume that training and test data share a similar distribution, which is not true in real-world settings. Cui and colleagues develop a stable Cox regression model that can identify stable variables for predicting survival outcomes under distribution shifts.

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来源期刊
CiteScore
36.90
自引率
2.10%
发文量
127
期刊介绍: Nature Machine Intelligence is a distinguished publication that presents original research and reviews on various topics in machine learning, robotics, and AI. Our focus extends beyond these fields, exploring their profound impact on other scientific disciplines, as well as societal and industrial aspects. We recognize limitless possibilities wherein machine intelligence can augment human capabilities and knowledge in domains like scientific exploration, healthcare, medical diagnostics, and the creation of safe and sustainable cities, transportation, and agriculture. Simultaneously, we acknowledge the emergence of ethical, social, and legal concerns due to the rapid pace of advancements. To foster interdisciplinary discussions on these far-reaching implications, Nature Machine Intelligence serves as a platform for dialogue facilitated through Comments, News Features, News & Views articles, and Correspondence. Our goal is to encourage a comprehensive examination of these subjects. Similar to all Nature-branded journals, Nature Machine Intelligence operates under the guidance of a team of skilled editors. We adhere to a fair and rigorous peer-review process, ensuring high standards of copy-editing and production, swift publication, and editorial independence.
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