{"title":"Classification-Based Detection and Quantification of Cross-Domain Data Bias in Materials Discovery.","authors":"Giovanni Trezza, Eliodoro Chiavazzo","doi":"10.1021/acs.jcim.4c01766","DOIUrl":null,"url":null,"abstract":"<p><p>It stands to reason that the amount and the quality of data are of key importance for setting up accurate artificial intelligence (AI)-driven models. Among others, a fundamental aspect to consider is the bias introduced during sample selection in database generation. This is particularly relevant when a model is trained on a specialized data set to predict a property of interest and then applied to forecast the same property over samples having a completely different genesis. Indeed, the resulting biased model will likely produce unreliable predictions for many of those out-of-the-box samples, i.e., samples out of the training set. Neglecting such an aspect may hinder the AI-based discovery process, even when high-quality, sufficiently large, and highly reputable data sources are available. To address this challenge, we propose a new method that detects and quantifies data bias, reducing its impact on materials discovery. Our approach, aimed at identifying and excluding those out-of-the-box materials for which the predictions of a pretrained model are likely unreliable, leverages a classification strategy and is validated by means of superconductor and thermoelectric materials as two representative case studies. This methodology, designed to be simple, flexible, and easily adaptable to any architecture, including modern graph equivariant neural networks, aims to enhance the reliability of AI models when applied to diverse and previously unseen materials, thereby contributing to more reliable AI-driven materials discovery.</p>","PeriodicalId":44,"journal":{"name":"Journal of Chemical Information and Modeling ","volume":" ","pages":""},"PeriodicalIF":5.6000,"publicationDate":"2024-12-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Chemical Information and Modeling ","FirstCategoryId":"92","ListUrlMain":"https://doi.org/10.1021/acs.jcim.4c01766","RegionNum":2,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"CHEMISTRY, MEDICINAL","Score":null,"Total":0}
引用次数: 0
Abstract
It stands to reason that the amount and the quality of data are of key importance for setting up accurate artificial intelligence (AI)-driven models. Among others, a fundamental aspect to consider is the bias introduced during sample selection in database generation. This is particularly relevant when a model is trained on a specialized data set to predict a property of interest and then applied to forecast the same property over samples having a completely different genesis. Indeed, the resulting biased model will likely produce unreliable predictions for many of those out-of-the-box samples, i.e., samples out of the training set. Neglecting such an aspect may hinder the AI-based discovery process, even when high-quality, sufficiently large, and highly reputable data sources are available. To address this challenge, we propose a new method that detects and quantifies data bias, reducing its impact on materials discovery. Our approach, aimed at identifying and excluding those out-of-the-box materials for which the predictions of a pretrained model are likely unreliable, leverages a classification strategy and is validated by means of superconductor and thermoelectric materials as two representative case studies. This methodology, designed to be simple, flexible, and easily adaptable to any architecture, including modern graph equivariant neural networks, aims to enhance the reliability of AI models when applied to diverse and previously unseen materials, thereby contributing to more reliable AI-driven materials discovery.
期刊介绍:
The Journal of Chemical Information and Modeling publishes papers reporting new methodology and/or important applications in the fields of chemical informatics and molecular modeling. Specific topics include the representation and computer-based searching of chemical databases, molecular modeling, computer-aided molecular design of new materials, catalysts, or ligands, development of new computational methods or efficient algorithms for chemical software, and biopharmaceutical chemistry including analyses of biological activity and other issues related to drug discovery.
Astute chemists, computer scientists, and information specialists look to this monthly’s insightful research studies, programming innovations, and software reviews to keep current with advances in this integral, multidisciplinary field.
As a subscriber you’ll stay abreast of database search systems, use of graph theory in chemical problems, substructure search systems, pattern recognition and clustering, analysis of chemical and physical data, molecular modeling, graphics and natural language interfaces, bibliometric and citation analysis, and synthesis design and reactions databases.