An HRP-integrated CRISPR/Cas12a biosensor towards chair-side diagnosis for Porphyromonas gingivalis.

IF 2 4区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Biotechnology Letters Pub Date : 2024-12-26 DOI:10.1007/s10529-024-03556-2
Ningning Pi, Rong Xiang, Lu Zhu, Yi Li, Xuan Wu
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Abstract

Rapid diagnostic tools for Porphyromonas gingivalis (Pg), the primary microorganism responsible for the development of periodontitis, particularly those designed for chair-side applications, could provide substantial health benefits to patients. To address this issue, we developed a CRISPR/Cas12a-based rapid Pg detection method. Dual-gRNA and hairpin reporter strategies were employed to enhance CRISPR/Cas12a reaction efficiency. By modifying the hairpin reporter with HRP, the pre-amplification-free HRP-CRISPR/Cas12a reaction was enabled to produce a colorimetric output, amplifying the detection signal. This method achieved high sensitivity (as low as 33 CFU) without the risk of aerosol contamination from pre-amplification. When testing clinical samples, the method showed high consistency with the reference RT-PCR. Furthermore, compared with RT-PCR, this method only requires room temperature operation, is simpler, and has a shorter detection time of about 35 min. In conclusion, the pre-amplification-free HRP-integrated CRISPR/Cas12a detection method requires no complex equipment, making it an ideal, end-user-friendly approach for chair-side Pg detection.

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结合酶标的CRISPR/Cas12a生物传感器用于牙龈卟啉单胞菌的椅子侧诊断。
牙龈卟啉单胞菌(Pg)是导致牙周炎的主要微生物,其快速诊断工具,特别是那些设计用于椅子侧应用的工具,可以为患者提供实质性的健康益处。为了解决这一问题,我们开发了一种基于CRISPR/ cas12的快速Pg检测方法。采用双grna和发夹报告策略提高CRISPR/Cas12a的反应效率。用HRP修饰发夹报告基因,使免扩增前的HRP- crispr /Cas12a反应产生比色输出,放大检测信号。该方法获得了高灵敏度(低至33 CFU),而没有预扩增造成气溶胶污染的风险。在检测临床样品时,该方法与参考RT-PCR具有较高的一致性。此外,与RT-PCR相比,该方法只需要室温操作,更简单,检测时间更短,约为35 min。综上所述,无扩增前酶标整合CRISPR/Cas12a检测方法不需要复杂的设备,是一种理想的、最终用户友好的椅子侧Pg检测方法。
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来源期刊
Biotechnology Letters
Biotechnology Letters 工程技术-生物工程与应用微生物
CiteScore
5.90
自引率
3.70%
发文量
108
审稿时长
1.2 months
期刊介绍: Biotechnology Letters is the world’s leading rapid-publication primary journal dedicated to biotechnology as a whole – that is to topics relating to actual or potential applications of biological reactions affected by microbial, plant or animal cells and biocatalysts derived from them. All relevant aspects of molecular biology, genetics and cell biochemistry, of process and reactor design, of pre- and post-treatment steps, and of manufacturing or service operations are therefore included. Contributions from industrial and academic laboratories are equally welcome. We also welcome contributions covering biotechnological aspects of regenerative medicine and biomaterials and also cancer biotechnology. Criteria for the acceptance of papers relate to our aim of publishing useful and informative results that will be of value to other workers in related fields. The emphasis is very much on novelty and immediacy in order to justify rapid publication of authors’ results. It should be noted, however, that we do not normally publish papers (but this is not absolute) that deal with unidentified consortia of microorganisms (e.g. as in activated sludge) as these results may not be easily reproducible in other laboratories. Papers describing the isolation and identification of microorganisms are not regarded as appropriate but such information can be appended as supporting information to a paper. Papers dealing with simple process development are usually considered to lack sufficient novelty or interest to warrant publication.
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