From laboratory to field: cross-domain few-shot learning for crop disease identification in the field.

IF 4.1 2区 生物学 Q1 PLANT SCIENCES Frontiers in Plant Science Pub Date : 2024-12-18 eCollection Date: 2024-01-01 DOI:10.3389/fpls.2024.1434222
Sen Yang, Quan Feng, Jianhua Zhang, Wanxia Yang, Wenwei Zhou, Wenbo Yan
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Abstract

Few-shot learning (FSL) methods have made remarkable progress in the field of plant disease recognition, especially in scenarios with limited available samples. However, current FSL approaches are usually limited to a restrictive setting where base classes and novel classes come from the same domain such as PlantVillage. Consequently, when the model is generalized to new domains (field disease datasets), its performance drops sharply. In this work, we revisit the cross-domain performance of existing FSL methods from both data and model perspectives, aiming to better achieve cross-domain generalization of disease by exploring inter-domain correlations. Specifically, we propose a broader cross-domain few-shot learning(CD-FSL) framework for crop disease identification that allows the classifier to generalize to previously unseen categories and domains. Within this framework, three representative CD-FSL models were developed by integrating the Brownian distance covariance (BCD) module and improving the general feature extractor, namely metric-based CD-FSL(CDFSL-BDC), optimization-based CD-FSL(CDFSL-MAML), and non-meta-learning-based CD-FSL (CDFSL-NML). To capture the impact of domain shift on model performance, six public datasets with inconsistent feature distributions between domains were selected as source domains. We provide a unified testbed to conduct extensive meta-training and meta-testing experiments on the proposed benchmarks to evaluate the generalization performance of CD-FSL in the disease domain. The results showed that the accuracy of the three CD-FSL models improved significantly as the inter-domain similarity increased. Compared with other state-of-the-art CD-FSL models, the CDFSL-BDC models had the best average performance under different domain gaps. Shifting from the pest domain to the crop disease domain, the CDFSL-BDC model achieved an accuracy of 63.95% and 80.13% in the 1-shot/5-shot setting, respectively. Furthermore, extensive evaluation on a multi-domain datasets demonstrated that multi-domain learning exhibits stronger domain transferability compared to single-domain learning when there is a large domain gap between the source and target domain. These comparative results suggest that optimizing the CD-FSL method from a data perspective is highly effective for solving disease identification tasks in field environments. This study holds promise for expanding the application of deep learning techniques in disease detection and provides a technical reference for cross-domain disease detection.

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从实验室到田间:田间作物病害鉴定的跨领域少镜头学习。
在植物病害识别领域,特别是在样本有限的情况下,小样本学习(FSL)方法取得了显著进展。然而,当前的FSL方法通常限于限制性设置,其中基类和新类来自相同的领域,如PlantVillage。因此,当模型推广到新的领域(现场疾病数据集)时,其性能急剧下降。在这项工作中,我们从数据和模型的角度重新审视现有FSL方法的跨域性能,旨在通过探索域间相关性来更好地实现疾病的跨域泛化。具体来说,我们提出了一个更广泛的跨领域少射学习(CD-FSL)框架用于作物病害识别,该框架允许分类器推广到以前未见过的类别和领域。在此框架下,通过整合布朗距离协方差(BCD)模块并改进通用特征提取器,构建了三个具有代表性的CD-FSL模型,即基于度量的CD-FSL(CDFSL-BDC)、基于优化的CD-FSL(CDFSL-MAML)和基于非元学习的CD-FSL(CDFSL-NML)。为了捕捉领域转移对模型性能的影响,选择6个领域之间特征分布不一致的公共数据集作为源领域。我们提供了一个统一的测试平台,在提出的基准上进行广泛的元训练和元测试实验,以评估CD-FSL在疾病领域的泛化性能。结果表明,随着域间相似性的增加,3种CD-FSL模型的精度显著提高。与其他先进的CD-FSL模型相比,CDFSL-BDC模型在不同域间隙下的平均性能最好。从害虫领域转移到作物病害领域,CDFSL-BDC模型在1针/5针设置下的准确率分别为63.95%和80.13%。此外,对多领域数据集的广泛评估表明,当源领域和目标领域之间存在较大的领域差距时,多领域学习比单领域学习表现出更强的领域可转移性。这些比较结果表明,从数据角度优化CD-FSL方法对于解决野外环境下的疾病识别任务是非常有效的。本研究有望拓展深度学习技术在疾病检测中的应用,为跨领域疾病检测提供技术参考。
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来源期刊
Frontiers in Plant Science
Frontiers in Plant Science PLANT SCIENCES-
CiteScore
7.30
自引率
14.30%
发文量
4844
审稿时长
14 weeks
期刊介绍: In an ever changing world, plant science is of the utmost importance for securing the future well-being of humankind. Plants provide oxygen, food, feed, fibers, and building materials. In addition, they are a diverse source of industrial and pharmaceutical chemicals. Plants are centrally important to the health of ecosystems, and their understanding is critical for learning how to manage and maintain a sustainable biosphere. Plant science is extremely interdisciplinary, reaching from agricultural science to paleobotany, and molecular physiology to ecology. It uses the latest developments in computer science, optics, molecular biology and genomics to address challenges in model systems, agricultural crops, and ecosystems. Plant science research inquires into the form, function, development, diversity, reproduction, evolution and uses of both higher and lower plants and their interactions with other organisms throughout the biosphere. Frontiers in Plant Science welcomes outstanding contributions in any field of plant science from basic to applied research, from organismal to molecular studies, from single plant analysis to studies of populations and whole ecosystems, and from molecular to biophysical to computational approaches. Frontiers in Plant Science publishes articles on the most outstanding discoveries across a wide research spectrum of Plant Science. The mission of Frontiers in Plant Science is to bring all relevant Plant Science areas together on a single platform.
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