Minimal catalytic dissipative assemblies via cooperation of an amino acid, a nucleobase precursor and a cofactor†

IF 7.4 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Chemical Science Pub Date : 2025-03-24 DOI:10.1039/D5SC00827A
Syed Pavel Afrose, Soumili Roy, Pratip Bhattacharyya, Ajeet Kumar Singh, Lisa Roy and Dibyendu Das
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Abstract

Functions arising from cooperation between protobiopolymers have fueled the chemical emergence of living matter, which requires a continuous supply of energy to exist in a far-from-equilibrium state. Non-equilibrium conditions imparted by available energy sources have played critical roles in the appearance of complex co-assembled architectures, which exploit the properties of different classes of biopolymers. Such co-assemblies formed from mixtures of nitrogenous heterocycles as protonucleobases and peptide precursors might have acted as early versions of catalytic machinery, capable of sustaining chemical reaction networks. Herein, we show the generation of catalytic non-equilibrium networks from a mixture of a nitrogenous heterocycle, an amino acid and a cofactor driven by an aromatic substrate. The cooperation, a result of supramolecular interactions between different components, rendered the assemblies capable of activating the cofactor towards oxidative degradation of the substrate, which resulted in autonomous disassembly (negative feedback). Furthermore, utilising promiscuous hydrolytic capability, the transient co-assemblies could metabolise a precursor to generate additional amounts of the substrate, enhancing the lifetime (positive feedback) of the assemblies.

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氨基酸、核碱基前体和辅因子协同作用的最小催化耗散组装
原生生物聚合物之间合作产生的功能推动了生命物质的化学出现,这些生命物质需要持续的能量供应才能在远离平衡的状态下生存。可获得的能量所赋予的非平衡条件在复杂的共组装结构的出现中起着关键作用,这些结构利用了不同种类生物聚合物的特性。作为原核碱基和肽前体的含氮杂环混合物形成的这种共组装物可能是能够维持化学反应网络的催化机制的早期版本。在此,我们展示了由芳香底物驱动的含氮杂环、氨基酸和辅因子的混合物产生的催化非平衡网络。这种合作是不同组分之间超分子相互作用的结果,使组件能够激活辅助因子,使底物氧化降解,从而导致自主拆卸(负反馈)。此外,利用混杂水解能力,瞬时共组装体可以代谢前体以产生额外量的底物,从而增强组装体的寿命(正反馈)。
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来源期刊
Chemical Science
Chemical Science CHEMISTRY, MULTIDISCIPLINARY-
CiteScore
14.40
自引率
4.80%
发文量
1352
审稿时长
2.1 months
期刊介绍: Chemical Science is a journal that encompasses various disciplines within the chemical sciences. Its scope includes publishing ground-breaking research with significant implications for its respective field, as well as appealing to a wider audience in related areas. To be considered for publication, articles must showcase innovative and original advances in their field of study and be presented in a manner that is understandable to scientists from diverse backgrounds. However, the journal generally does not publish highly specialized research.
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