FastPtx:使用 Pytorch 自分化技术快速联合设计 pTx 射频和梯度脉冲的多功能工具箱

IF 2 4区 医学 Q3 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING Magnetic Resonance Materials in Physics, Biology and Medicine Pub Date : 2023-12-08 DOI:10.1007/s10334-023-01134-7
Dario Bosch, Klaus Scheffler
{"title":"FastPtx:使用 Pytorch 自分化技术快速联合设计 pTx 射频和梯度脉冲的多功能工具箱","authors":"Dario Bosch, Klaus Scheffler","doi":"10.1007/s10334-023-01134-7","DOIUrl":null,"url":null,"abstract":"<h3 data-test=\"abstract-sub-heading\">Objective</h3><p>With modern optimization methods, free optimization of parallel transmit pulses together with their gradient waveforms can be performed on-line within a short time. A toolbox which uses PyTorch’s autodifferentiation for simultaneous optimization of RF and gradient waveforms is presented and its performance is evaluated.</p><h3 data-test=\"abstract-sub-heading\">Methods</h3><p>MR measurements were performed on a 9.4T MRI scanner using a 3D saturated single-shot turboFlash sequence for <span>\\(B_1^+\\)</span> mapping. RF pulse simulation and optimization were done using a Python toolbox and a dedicated server. An RF- and Gradient pulse design toolbox was developed, including a cost function to balance different metrics and respect hardware and regulatory limits. Pulse performance was evaluated in GRE and MPRAGE imaging. Pulses for non-selective and for slab-selective excitation were designed.</p><h3 data-test=\"abstract-sub-heading\">Results</h3><p>Universal pulses for non-selective excitation reduced the flip angle error to an NRMSE of (12.3±1.7)% relative to the targeted flip angle in simulations, compared to (42.0±1.4)% in CP mode. The tailored pulses performed best, resulting in a narrow flip angle distribution with NRMSE of (8.2±1.0)%. The tailored pulses could be created in only 66 s, making it feasible to design them during an experiment. A 90° pulse was designed as preparation pulse for a satTFL sequence and achieved a NRMSE of 7.1%. We showed that both MPRAGE and GRE imaging benefited from the pTx pulses created with our toolbox.</p><h3 data-test=\"abstract-sub-heading\">Conclusion</h3><p>The pTx pulse design toolbox can freely optimize gradient and pTx RF waveforms in a short time. This allows for tailoring high-quality pulses in just over a minute.</p>","PeriodicalId":18067,"journal":{"name":"Magnetic Resonance Materials in Physics, Biology and Medicine","volume":null,"pages":null},"PeriodicalIF":2.0000,"publicationDate":"2023-12-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"FastPtx: a versatile toolbox for rapid, joint design of pTx RF and gradient pulses using Pytorch’s autodifferentiation\",\"authors\":\"Dario Bosch, Klaus Scheffler\",\"doi\":\"10.1007/s10334-023-01134-7\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<h3 data-test=\\\"abstract-sub-heading\\\">Objective</h3><p>With modern optimization methods, free optimization of parallel transmit pulses together with their gradient waveforms can be performed on-line within a short time. A toolbox which uses PyTorch’s autodifferentiation for simultaneous optimization of RF and gradient waveforms is presented and its performance is evaluated.</p><h3 data-test=\\\"abstract-sub-heading\\\">Methods</h3><p>MR measurements were performed on a 9.4T MRI scanner using a 3D saturated single-shot turboFlash sequence for <span>\\\\(B_1^+\\\\)</span> mapping. RF pulse simulation and optimization were done using a Python toolbox and a dedicated server. An RF- and Gradient pulse design toolbox was developed, including a cost function to balance different metrics and respect hardware and regulatory limits. Pulse performance was evaluated in GRE and MPRAGE imaging. Pulses for non-selective and for slab-selective excitation were designed.</p><h3 data-test=\\\"abstract-sub-heading\\\">Results</h3><p>Universal pulses for non-selective excitation reduced the flip angle error to an NRMSE of (12.3±1.7)% relative to the targeted flip angle in simulations, compared to (42.0±1.4)% in CP mode. The tailored pulses performed best, resulting in a narrow flip angle distribution with NRMSE of (8.2±1.0)%. The tailored pulses could be created in only 66 s, making it feasible to design them during an experiment. A 90° pulse was designed as preparation pulse for a satTFL sequence and achieved a NRMSE of 7.1%. We showed that both MPRAGE and GRE imaging benefited from the pTx pulses created with our toolbox.</p><h3 data-test=\\\"abstract-sub-heading\\\">Conclusion</h3><p>The pTx pulse design toolbox can freely optimize gradient and pTx RF waveforms in a short time. This allows for tailoring high-quality pulses in just over a minute.</p>\",\"PeriodicalId\":18067,\"journal\":{\"name\":\"Magnetic Resonance Materials in Physics, Biology and Medicine\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":2.0000,\"publicationDate\":\"2023-12-08\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Magnetic Resonance Materials in Physics, Biology and Medicine\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://doi.org/10.1007/s10334-023-01134-7\",\"RegionNum\":4,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Magnetic Resonance Materials in Physics, Biology and Medicine","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.1007/s10334-023-01134-7","RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING","Score":null,"Total":0}
引用次数: 0

摘要

目的利用现代优化方法,可在短时间内在线自由优化并行发射脉冲及其梯度波形。方法在一台9.4T核磁共振扫描仪上使用三维饱和单发涡轮闪烁序列进行MR测量,以进行\(B_1^+\)映射。射频脉冲模拟和优化是使用 Python 工具箱和专用服务器完成的。我们开发了一个射频和梯度脉冲设计工具箱,其中包括一个成本函数,用于平衡不同的指标并遵守硬件和法规限制。在 GRE 和 MPRAGE 成像中对脉冲性能进行了评估。结果用于非选择性激励的通用脉冲在模拟中将翻转角误差降低到相对于目标翻转角的 NRMSE (12.3±1.7)% ,而在 CP 模式中为 (42.0±1.4)%。量身定制的脉冲表现最佳,产生了窄翻转角分布,NRMSE 为 (8.2±1.0)%。定制脉冲仅需 66 秒即可创建,因此在实验过程中设计这些脉冲是可行的。我们设计了一个 90° 脉冲作为 satTFL 序列的准备脉冲,其 NRMSE 为 7.1%。结论pTx 脉冲设计工具箱可在短时间内自由优化梯度和 pTx 射频波形。这样就能在一分钟内定制出高质量的脉冲。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

摘要图片

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
FastPtx: a versatile toolbox for rapid, joint design of pTx RF and gradient pulses using Pytorch’s autodifferentiation

Objective

With modern optimization methods, free optimization of parallel transmit pulses together with their gradient waveforms can be performed on-line within a short time. A toolbox which uses PyTorch’s autodifferentiation for simultaneous optimization of RF and gradient waveforms is presented and its performance is evaluated.

Methods

MR measurements were performed on a 9.4T MRI scanner using a 3D saturated single-shot turboFlash sequence for \(B_1^+\) mapping. RF pulse simulation and optimization were done using a Python toolbox and a dedicated server. An RF- and Gradient pulse design toolbox was developed, including a cost function to balance different metrics and respect hardware and regulatory limits. Pulse performance was evaluated in GRE and MPRAGE imaging. Pulses for non-selective and for slab-selective excitation were designed.

Results

Universal pulses for non-selective excitation reduced the flip angle error to an NRMSE of (12.3±1.7)% relative to the targeted flip angle in simulations, compared to (42.0±1.4)% in CP mode. The tailored pulses performed best, resulting in a narrow flip angle distribution with NRMSE of (8.2±1.0)%. The tailored pulses could be created in only 66 s, making it feasible to design them during an experiment. A 90° pulse was designed as preparation pulse for a satTFL sequence and achieved a NRMSE of 7.1%. We showed that both MPRAGE and GRE imaging benefited from the pTx pulses created with our toolbox.

Conclusion

The pTx pulse design toolbox can freely optimize gradient and pTx RF waveforms in a short time. This allows for tailoring high-quality pulses in just over a minute.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
CiteScore
4.60
自引率
0.00%
发文量
58
审稿时长
>12 weeks
期刊介绍: MAGMA is a multidisciplinary international journal devoted to the publication of articles on all aspects of magnetic resonance techniques and their applications in medicine and biology. MAGMA currently publishes research papers, reviews, letters to the editor, and commentaries, six times a year. The subject areas covered by MAGMA include: advances in materials, hardware and software in magnetic resonance technology, new developments and results in research and practical applications of magnetic resonance imaging and spectroscopy related to biology and medicine, study of animal models and intact cells using magnetic resonance, reports of clinical trials on humans and clinical validation of magnetic resonance protocols.
期刊最新文献
Accelerating multi-coil MR image reconstruction using weak supervision. Real-time automated quality control for quantitative MRI. Compressed SVD-based L + S model to reconstruct undersampled dynamic MRI data using parallel architecture. Impact of truncating diffusion MRI scans on diffusional kurtosis imaging. Diffusion weighted imaging combining respiratory triggering and navigator echo tracking in the upper abdomen.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1