通过光学吸收、热学和电学测量探索癌症和非癌症 DNA 分子的变性:案例研究

Owais I. Mir , Upendra K. Gupta , Iqbal Qasim , Arshad A. Pandith , Feroz A. Mir
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摘要

在本文中,我们对单个患者的正常和癌症(胶质瘤)DNA 样本进行了温度依赖性紫外-可见(UV-Vis)光谱、差示扫描量热法(DSC)和电学研究。基于这种方法,我们能够监测这些分子的变性过程和热稳定性。根据与温度相关的光吸收数据,我们计算出了这两种样本的各种光学参数。我们还根据实验条件对这些样品的光带隙进行了估算和讨论。计算得出的各种光学参数表明,变异(肿瘤)DNA 的稳定性低于正常 DNA。从 DSC 数据中可以观察到肿瘤和正常样品都有明显的熔化峰。此外,还估算了各种热力学参数,如焓变(ΔH)、熵变(ΔS)和比热(Cp)。从热研究来看,肿瘤 DNA 的稳定性较差。此外,从电学或电流-电压(I-V)特性数据来看,正常 DNA 的电阻随温度升高而降低。而肿瘤样本的电阻则随着温度的升高而呈现反常现象(如先减小后增大的趋势)。对于电子传输而言,小极子跳变可能是当前样品中的传输机制。从这些研究来看,肿瘤样品似乎更无序,而推测的结构波动可能是这种行为的最佳原因。如果这类分子(纳米尺度范围内)研究做得更生动,那么除了临床研究外,这些计算出的分子参数还可用于进一步确认/诊断疾病。
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Exploring the denaturations in cancer and non-cancer DNA molecules by optical absorption, thermal, and electric measurements: A case study

In this article, we carried out the temperature dependent UV-Visible (UV-Vis) spectroscopy, differential scanning calorimetry (DSC), and electrical studies for normal and cancerous (glioma) DNA samples of single patient. Based on this method, we were able to monitor the denaturation process and thermal stability in these molecules. From the temperature dependent optical absorption data, we calculated various optical parameters for these two types of samples. The optical band gap of these samples were also estimated and discussed as per the experimental conditions. The various optical parameters calculated indicate that mutated (tumor) DNA is less stable than the normal one. From the DSC data, clear melting peaks were observed for the tumor and normal samples. Also various thermodynamic parameters like change in enthalpy (ΔH), entropy (ΔS), and specific heat (Cp) were estimated. From the thermal study, it seems that the tumor DNA is less stable. Further from the electrical or current-voltage (I-V) characteristics data, the resistance for normal DNA decreases with temperature. But for tumor sample, it show anomalous behavior (like decreasing and then increasing trend) with temperature. For electrical transport, small polaron hopping could be the possible transport mechanism in the current sample. Here from these studies, the tumor sample seems more disordered, and structural fluctuations due to the speculated structure could be the best reason for this behavior. If such kind of molecular (at nano scale range) studied are done more vividly, then these calculated parameters of the molecule could be explored for further confirmation/diagnostics of the diseases in addition to clinical investigations.

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