Lei Xie, Zelin Zhuang, Xiaona Lin, Xiaoyan Shi, Yanmin Zheng, Kailuan Wu, Shuhua Ma
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Therefore, this study applied a machine-learning approach based on resting-state functional magnetic resonance imaging (rs-fMRI) whole-brain functional connectivity (FC) to distinguish IBS patients from healthy controls (HCs).</p><p><strong>Methods: </strong>A total of 176 subjects, comprising 88 consecutive patients with IBS and 88 age-, sex- and education-matched HCs, were enrolled in this study between January 2020 and January 2024 at the First Affiliated Hospital of Shantou University Medical College. All the subjects underwent rs-fMRI and high-resolution anatomical T1-weighted imaging (T1WI) examinations. Following the preprocessing of the rs-fMRI image data, FC matrices between all regions of interest (ROIs) were extracted using automated anatomical labeling (AAL). Subsequently, supervised machine learning was performed using whole-brain FC for classification features to identify the best-performing model. Finally, weights of the optimal model's features were exported to confirm the neuroanatomical regions significantly influencing model establishment.</p><p><strong>Results: </strong>Compared with other supervised learning models, the support vector machine (SVM) model had significantly higher classification accuracy and performed significantly better than the other models (P<0.05) with a classification accuracy of 75% and an area under the curve (AUC) of 0.7788 (95% confidence interval [CI]: 0.6861-0.8715) (P<0.01). In addition, the FC features from the Rolandic operculum (ROL) to the anterior cingulate gyrus (ACG), the calcarine sulcus (CAL) to the triangular part of the inferior frontal gyrus (IFG), the gyrus rectus (REC) to the inferior occipital gyrus (IOG), the lingual gyrus (LING) to the putamen (PUT), and the IOG to the angular gyrus (ANG) were relatively important in the construction of the machine-learning models.</p><p><strong>Conclusions: </strong>The SVM was the optimal machine-learning model for effectively classifying IBS patients and HCs based on whole-brain resting-state FC matrices. The FC features between the emotion-related brain regions significantly affected the construction of the machine-learning models. As a classification feature in machine learning, whole-brain resting-state FC holds the potential to achieve precision medicine in IBS and enhance disease diagnostic efficacy.</p>","PeriodicalId":54267,"journal":{"name":"Quantitative Imaging in Medicine and Surgery","volume":null,"pages":null},"PeriodicalIF":2.9000,"publicationDate":"2024-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11485364/pdf/","citationCount":"0","resultStr":"{\"title\":\"Support vector machine classification of irritable bowel syndrome patients based on whole-brain resting-state functional connectivity features.\",\"authors\":\"Lei Xie, Zelin Zhuang, Xiaona Lin, Xiaoyan Shi, Yanmin Zheng, Kailuan Wu, Shuhua Ma\",\"doi\":\"10.21037/qims-24-892\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><strong>Background: </strong>Irritable bowel syndrome (IBS) is a disorder characterized by signaling dysregulation between the brain and gut, leading to gastrointestinal dysfunction. 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Following the preprocessing of the rs-fMRI image data, FC matrices between all regions of interest (ROIs) were extracted using automated anatomical labeling (AAL). Subsequently, supervised machine learning was performed using whole-brain FC for classification features to identify the best-performing model. Finally, weights of the optimal model's features were exported to confirm the neuroanatomical regions significantly influencing model establishment.</p><p><strong>Results: </strong>Compared with other supervised learning models, the support vector machine (SVM) model had significantly higher classification accuracy and performed significantly better than the other models (P<0.05) with a classification accuracy of 75% and an area under the curve (AUC) of 0.7788 (95% confidence interval [CI]: 0.6861-0.8715) (P<0.01). 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引用次数: 0
摘要
背景:肠易激综合征(IBS肠易激综合征(IBS)是一种以大脑和肠道之间信号失调为特征的疾病,会导致胃肠功能紊乱。腹痛和便秘等症状可表现为周期性或持续性,负面情绪可能会加重症状。以往的研究表明,肠易激综合征的发病机制与脑-肠轴和大脑功能密切相关,但在疾病诊断方面仍存在困难。因此,本研究采用基于静息态功能磁共振成像(rs-fMRI)全脑功能连接(FC)的机器学习方法来区分肠易激综合征患者和健康对照组(HCs):2020年1月至2024年1月期间,汕头大学医学院第一附属医院共招募了176名受试者,包括88名连续的肠易激综合征患者和88名年龄、性别和教育程度相匹配的健康对照组。所有受试者均接受了 rs-fMRI 和高分辨率解剖 T1 加权成像(T1WI)检查。在对rs-fMRI图像数据进行预处理后,使用自动解剖标记(AAL)提取所有感兴趣区(ROI)之间的FC矩阵。随后,使用全脑 FC 作为分类特征进行有监督的机器学习,以确定表现最佳的模型。最后,输出最佳模型特征的权重,以确认对模型建立有显著影响的神经解剖区域:结果:与其他监督学习模型相比,支持向量机(SVM)模型的分类准确率明显更高,其表现也明显优于其他模型(PC结论:SVM是最佳的机器学习模型:SVM是基于全脑静息态FC矩阵对IBS患者和HC进行有效分类的最佳机器学习模型。情绪相关脑区之间的 FC 特征对机器学习模型的构建有显著影响。作为机器学习的分类特征,全脑静息态FC有望实现IBS的精准医疗,提高疾病诊断效果。
Support vector machine classification of irritable bowel syndrome patients based on whole-brain resting-state functional connectivity features.
Background: Irritable bowel syndrome (IBS) is a disorder characterized by signaling dysregulation between the brain and gut, leading to gastrointestinal dysfunction. Symptoms such as abdominal pain and constipation can manifest periodically or persistently, and negative emotions may exacerbate the symptoms. Previous studies have shown that the pathogenesis of IBS is closely related to the brain-gut axis and brain function, but there are still difficulties in disease diagnosis. Therefore, this study applied a machine-learning approach based on resting-state functional magnetic resonance imaging (rs-fMRI) whole-brain functional connectivity (FC) to distinguish IBS patients from healthy controls (HCs).
Methods: A total of 176 subjects, comprising 88 consecutive patients with IBS and 88 age-, sex- and education-matched HCs, were enrolled in this study between January 2020 and January 2024 at the First Affiliated Hospital of Shantou University Medical College. All the subjects underwent rs-fMRI and high-resolution anatomical T1-weighted imaging (T1WI) examinations. Following the preprocessing of the rs-fMRI image data, FC matrices between all regions of interest (ROIs) were extracted using automated anatomical labeling (AAL). Subsequently, supervised machine learning was performed using whole-brain FC for classification features to identify the best-performing model. Finally, weights of the optimal model's features were exported to confirm the neuroanatomical regions significantly influencing model establishment.
Results: Compared with other supervised learning models, the support vector machine (SVM) model had significantly higher classification accuracy and performed significantly better than the other models (P<0.05) with a classification accuracy of 75% and an area under the curve (AUC) of 0.7788 (95% confidence interval [CI]: 0.6861-0.8715) (P<0.01). In addition, the FC features from the Rolandic operculum (ROL) to the anterior cingulate gyrus (ACG), the calcarine sulcus (CAL) to the triangular part of the inferior frontal gyrus (IFG), the gyrus rectus (REC) to the inferior occipital gyrus (IOG), the lingual gyrus (LING) to the putamen (PUT), and the IOG to the angular gyrus (ANG) were relatively important in the construction of the machine-learning models.
Conclusions: The SVM was the optimal machine-learning model for effectively classifying IBS patients and HCs based on whole-brain resting-state FC matrices. The FC features between the emotion-related brain regions significantly affected the construction of the machine-learning models. As a classification feature in machine learning, whole-brain resting-state FC holds the potential to achieve precision medicine in IBS and enhance disease diagnostic efficacy.