{"title":"从患者数据中发现临床路径的机器学习方法:系统综述。","authors":"Lillian Muyama , Antoine Neuraz , Adrien Coulet","doi":"10.1016/j.jbi.2024.104746","DOIUrl":null,"url":null,"abstract":"<div><h3>Background:</h3><div>Clinical pathways are sequences of events followed during the clinical care of a group of patients who meet pre-defined criteria. They have many applications ranging from healthcare evaluation and optimization to clinical decision support. These pathways can be discovered from existing healthcare data, in particular with machine learning which is a family of methods used to learn patterns from data. This review provides a comprehensive overview of the literature concerning the use of machine learning methods for clinical pathway discovery from patient data.</div></div><div><h3>Methods:</h3><div>Guided by the Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) method , we conducted a systematic review of the existing literature. We searched 6 databases, <em>i.e.</em>, ACM Digital Library, ScienceDirect, Web of Science, PubMed, IEEE Xplore, and Scopus spanning from January 2004 to December 2023 using search terms pertinent to clinical pathways and their development. Subsequently, the retrieved papers were analyzed to assess their relevance to the scope of this study.</div></div><div><h3>Results:</h3><div>In total, 131 papers that met the specified inclusion criteria were identified. These papers expressed diverse motivations behind data-driven clinical pathway discovery ranging from knowledge discovery to conformance checking with established clinical guidelines (derived from existing literature and clinical experts). Notably, the predominant methods employed (67.2%, <span><math><mi>n</mi></math></span>=88) involved unsupervised machine learning techniques, such as clustering and process mining.</div></div><div><h3>Conclusions:</h3><div>Relevant clinical pathways can be discovered from patient data using machine learning methods, with the desirable potential to aid clinical decision-making in healthcare. However, to reach this objective, the methods used to discover pathways should be reproducible, and rigorous performance evaluation by clinical experts needs to be conducted for validation.</div></div>","PeriodicalId":15263,"journal":{"name":"Journal of Biomedical Informatics","volume":"160 ","pages":"Article 104746"},"PeriodicalIF":4.0000,"publicationDate":"2024-11-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Machine learning approaches for the discovery of clinical pathways from patient data: A systematic review\",\"authors\":\"Lillian Muyama , Antoine Neuraz , Adrien Coulet\",\"doi\":\"10.1016/j.jbi.2024.104746\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><h3>Background:</h3><div>Clinical pathways are sequences of events followed during the clinical care of a group of patients who meet pre-defined criteria. They have many applications ranging from healthcare evaluation and optimization to clinical decision support. These pathways can be discovered from existing healthcare data, in particular with machine learning which is a family of methods used to learn patterns from data. This review provides a comprehensive overview of the literature concerning the use of machine learning methods for clinical pathway discovery from patient data.</div></div><div><h3>Methods:</h3><div>Guided by the Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) method , we conducted a systematic review of the existing literature. We searched 6 databases, <em>i.e.</em>, ACM Digital Library, ScienceDirect, Web of Science, PubMed, IEEE Xplore, and Scopus spanning from January 2004 to December 2023 using search terms pertinent to clinical pathways and their development. Subsequently, the retrieved papers were analyzed to assess their relevance to the scope of this study.</div></div><div><h3>Results:</h3><div>In total, 131 papers that met the specified inclusion criteria were identified. These papers expressed diverse motivations behind data-driven clinical pathway discovery ranging from knowledge discovery to conformance checking with established clinical guidelines (derived from existing literature and clinical experts). Notably, the predominant methods employed (67.2%, <span><math><mi>n</mi></math></span>=88) involved unsupervised machine learning techniques, such as clustering and process mining.</div></div><div><h3>Conclusions:</h3><div>Relevant clinical pathways can be discovered from patient data using machine learning methods, with the desirable potential to aid clinical decision-making in healthcare. However, to reach this objective, the methods used to discover pathways should be reproducible, and rigorous performance evaluation by clinical experts needs to be conducted for validation.</div></div>\",\"PeriodicalId\":15263,\"journal\":{\"name\":\"Journal of Biomedical Informatics\",\"volume\":\"160 \",\"pages\":\"Article 104746\"},\"PeriodicalIF\":4.0000,\"publicationDate\":\"2024-11-12\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Biomedical Informatics\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S1532046424001643\",\"RegionNum\":2,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Biomedical Informatics","FirstCategoryId":"3","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S1532046424001643","RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS","Score":null,"Total":0}
Machine learning approaches for the discovery of clinical pathways from patient data: A systematic review
Background:
Clinical pathways are sequences of events followed during the clinical care of a group of patients who meet pre-defined criteria. They have many applications ranging from healthcare evaluation and optimization to clinical decision support. These pathways can be discovered from existing healthcare data, in particular with machine learning which is a family of methods used to learn patterns from data. This review provides a comprehensive overview of the literature concerning the use of machine learning methods for clinical pathway discovery from patient data.
Methods:
Guided by the Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) method , we conducted a systematic review of the existing literature. We searched 6 databases, i.e., ACM Digital Library, ScienceDirect, Web of Science, PubMed, IEEE Xplore, and Scopus spanning from January 2004 to December 2023 using search terms pertinent to clinical pathways and their development. Subsequently, the retrieved papers were analyzed to assess their relevance to the scope of this study.
Results:
In total, 131 papers that met the specified inclusion criteria were identified. These papers expressed diverse motivations behind data-driven clinical pathway discovery ranging from knowledge discovery to conformance checking with established clinical guidelines (derived from existing literature and clinical experts). Notably, the predominant methods employed (67.2%, =88) involved unsupervised machine learning techniques, such as clustering and process mining.
Conclusions:
Relevant clinical pathways can be discovered from patient data using machine learning methods, with the desirable potential to aid clinical decision-making in healthcare. However, to reach this objective, the methods used to discover pathways should be reproducible, and rigorous performance evaluation by clinical experts needs to be conducted for validation.
期刊介绍:
The Journal of Biomedical Informatics reflects a commitment to high-quality original research papers, reviews, and commentaries in the area of biomedical informatics methodology. Although we publish articles motivated by applications in the biomedical sciences (for example, clinical medicine, health care, population health, and translational bioinformatics), the journal emphasizes reports of new methodologies and techniques that have general applicability and that form the basis for the evolving science of biomedical informatics. Articles on medical devices; evaluations of implemented systems (including clinical trials of information technologies); or papers that provide insight into a biological process, a specific disease, or treatment options would generally be more suitable for publication in other venues. Papers on applications of signal processing and image analysis are often more suitable for biomedical engineering journals or other informatics journals, although we do publish papers that emphasize the information management and knowledge representation/modeling issues that arise in the storage and use of biological signals and images. System descriptions are welcome if they illustrate and substantiate the underlying methodology that is the principal focus of the report and an effort is made to address the generalizability and/or range of application of that methodology. Note also that, given the international nature of JBI, papers that deal with specific languages other than English, or with country-specific health systems or approaches, are acceptable for JBI only if they offer generalizable lessons that are relevant to the broad JBI readership, regardless of their country, language, culture, or health system.