NKD抑制剂WNT信号通路1 (NKD1)在胶质母细胞瘤中的临床意义。

IF 1.4 4区 生物学 Q4 GENETICS & HEREDITY Genetics research Pub Date : 2023-01-01 DOI:10.1155/2023/1184101
Lijun Li, Ruiying Gao, Weizhong Huangfu, Fang Zhang, Ruixia Wang
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引用次数: 1

摘要

胶质母细胞瘤是恶性程度最高的胶质瘤类型,其预后令人失望。在这里,我们旨在研究Wnt信号通路1的NKD抑制剂(NKD1)在胶质母细胞瘤中的表达和功能,NKD1是Wnt- β -连环蛋白信号通路的拮抗剂。方法:首先从TCGA胶质瘤数据集中检索NKD1 mRNA水平,评估其与临床特征的相关性及其在预后预测中的价值。然后,在我们医学中心收集的回顾性队列(n = 66)中,通过免疫组织化学染色检测其在胶质母细胞瘤中的蛋白表达水平。通过单因素和多因素生存分析来评估其对胶质瘤预后的影响。我们利用两种胶质母细胞瘤细胞系U87和U251,通过过表达策略结合细胞增殖试验,进一步研究了NKD1在肿瘤中的相关作用。最后利用生物信息学分析评估胶质母细胞瘤中免疫细胞的富集及其与NKD1水平的相关性。结果:与正常脑或其他胶质瘤亚型相比,NKD1在胶质母细胞瘤中的表达水平较低,这与TCGA队列和我们的回顾性队列预后较差独立相关。在胶质母细胞瘤细胞系中过表达NKD1可显著减弱细胞增殖。此外,NKD1在胶质母细胞瘤中的表达与T细胞浸润呈负相关,提示其可能与肿瘤免疫微环境存在串扰。结论:NKD1抑制胶质母细胞瘤的进展,其表达下调提示预后不良。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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Clinical Significance of NKD Inhibitor of WNT Signaling Pathway 1 (NKD1) in Glioblastoma.

Introduction: As the most malignant type of gliomas, glioblastoma is characterized with disappointing prognosis. Here, we aimed to investigate expression and function of NKD inhibitor of Wnt signaling pathway 1 (NKD1), an antagonist of Wnt-beta-catenin signaling pathways, in glioblastoma.

Methods: The mRNA level of NKD1 was firstly retrieved from TCGA glioma dataset to evaluate its correlation with clinical characteristics and its value in prognosis prediction. Then, its protein expression level in glioblastoma was tested by immunohistochemistry staining in a retrospectively cohort collected from our medical center (n = 66). Univariate and multivariate survival analyses were conducted to assess its effect on glioma prognosis. Two glioblastoma cell lines, U87 and U251, were used to further investigate the tumor-related role of NKD1 through overexpression strategy in combination with cell proliferation assays. Immune cell enrichment in glioblastoma and its correlation with NKD1 level was finally assessed using bioinformatics analyses.

Results: NKD1 shows a lower expression level in glioblastoma compared to that in the normal brain or other glioma subtypes, which is independently correlated to a worse prognosis in both the TCGA cohort and our retrospective cohort. Overexpressing NKD1 in glioblastoma cell lines can significantly attenuate cell proliferation. In addition, expression of NKD1 in glioblastoma is negatively correlated to the T cell infiltration, indicating it may have crosstalk with the tumor immune microenvironment.

Conclusions: NKD1 inhibits glioblastoma progression and its downregulated expression indicates a poor prognosis.

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来源期刊
Genetics research
Genetics research 生物-遗传学
自引率
6.70%
发文量
74
审稿时长
>12 weeks
期刊介绍: Genetics Research is a key forum for original research on all aspects of human and animal genetics, reporting key findings on genomes, genes, mutations and molecular interactions, extending out to developmental, evolutionary, and population genetics as well as ethical, legal and social aspects. Our aim is to lead to a better understanding of genetic processes in health and disease. The journal focuses on the use of new technologies, such as next generation sequencing together with bioinformatics analysis, to produce increasingly detailed views of how genes function in tissues and how these genes perform, individually or collectively, in normal development and disease aetiology. The journal publishes original work, review articles, short papers, computational studies, and novel methods and techniques in research covering humans and well-established genetic organisms. Key subject areas include medical genetics, genomics, human evolutionary and population genetics, bioinformatics, genetics of complex traits, molecular and developmental genetics, Evo-Devo, quantitative and statistical genetics, behavioural genetics and environmental genetics. The breadth and quality of research make the journal an invaluable resource for medical geneticists, molecular biologists, bioinformaticians and researchers involved in genetic basis of diseases, evolutionary and developmental studies.
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