All-body concept and quantified limits of cooperativity and related effects in homodromic cyclic water clusters from a molecular-wide and electron density-based approach

IF 3.4 3区 化学 Q2 CHEMISTRY, MULTIDISCIPLINARY Journal of Computational Chemistry Pub Date : 2024-08-27 DOI:10.1002/jcc.27489
Ignacy Cukrowski, Stéfan Zaaiman, Shahnawaz Hussain, Jurgens H. de Lange
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Abstract

We strongly advocate distinguishing cooperativity from cooperativity-induced effects. From the MOWeD-based approach, the origin of all-body cooperativity is synonymous with physics- and quantum-based processes of electron (e) delocalization throughout water clusters. To this effect, over 10 atom-pairs contribute to the total e-density at a BCP(H,O) between water molecules in a tetramer. Intermolecular all-body e-delocalization, that is, cooperativity, is an energy-minimizing process that fully explains non-additive increase in stability of a water molecule in clusters with an increase in their size. A non-linear change in cooperativity and cooperativity-induced effects, such as (i) structural (e.g., a change in d(O,O)) or topological intra- and intermolecular properties in water clusters (e.g., electron density or potential energy density at bond critical points) is theoretically reproduced by the proposed expression. It predicted the limiting value of delocalized electrons by a H2O molecule in homodromic cyclic clusters to be 1.58e. O-atoms provide the vast majority of electrons that “travel throughout a cluster predominantly on a privileged exchange quantum density highway” (⋅⋅⋅O–H⋅⋅⋅O–H⋅⋅⋅O–H⋅⋅⋅) using Bader's classical bond paths as density bridges linking water molecules. There are, however, additional electron exchange channels that are not seen on molecular graphs as bond paths. A 3D visual representation of the “privileged” and “additional” exchange channels as well as detailed intra- and inter-molecular patterns of e-sharing and (de)localizing is presented. The energy stabilizing contribution made by three O-atoms of neighboring water molecules was found to be large (−597 kcal/mol in cyclic hexamer) and 5 times more significant than that of a classical O–H⋅⋅⋅O intermolecular H-bond.

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从全分子和基于电子密度的方法看同调环状水簇中合作性和相关效应的全身概念和量化极限。
我们强烈主张将合作性与合作性诱导效应区分开来。从基于 MOWeD 的方法来看,全身合作性的起源与整个水簇中电子(e)脱局的物理和量子过程同义。为此,四聚体中水分子之间的 BCP(H,O)处的总电子密度由 10 多个原子对组成。分子间的全身电子异化,即合作性,是一个能量最小化的过程,它能充分解释水分子在水簇中的稳定性随着水簇大小的增加而增加的原因。所提出的表达式从理论上再现了合作性的非线性变化和合作性引起的效应,如:(i) 水簇的结构特性(如 d(O,O)的变化)或分子内和分子间拓扑特性(如键临界点的电子密度或势能密度)。它预测了同向性环状水簇中 H2O 分子的脱电子限值为 1.58e。O原子提供了绝大多数电子,这些电子 "主要通过特权交换量子密度高速公路"(⋅⋅O⋅⋅-H⋅⋅O⋅⋅-H⋅⋅O⋅⋅-H⋅⋅)在整个原子团中移动,使用巴德尔的经典键路径作为连接水分子的密度桥梁。然而,还有一些额外的电子交换通道在分子图上没有被看作是键路径。本文以三维直观的方式展示了 "特权 "和 "附加 "交换通道,以及分子内和分子间电子共享和(去)定位的详细模式。研究发现,相邻水分子的三个 O 原子对能量稳定的贡献很大(在环状六聚物中为-597 kcal/mol),比经典的 O-H⋅⋅O 分子间 H 键的贡献大 5 倍。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
CiteScore
6.60
自引率
3.30%
发文量
247
审稿时长
1.7 months
期刊介绍: This distinguished journal publishes articles concerned with all aspects of computational chemistry: analytical, biological, inorganic, organic, physical, and materials. The Journal of Computational Chemistry presents original research, contemporary developments in theory and methodology, and state-of-the-art applications. Computational areas that are featured in the journal include ab initio and semiempirical quantum mechanics, density functional theory, molecular mechanics, molecular dynamics, statistical mechanics, cheminformatics, biomolecular structure prediction, molecular design, and bioinformatics.
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