DDANet: A deep dilated attention network for intracerebral haemorrhage segmentation.

IF 1.9 4区 生物学 Q4 CELL BIOLOGY IET Systems Biology Pub Date : 2024-11-24 DOI:10.1049/syb2.12103
Haiyan Liu, Yu Zeng, Hao Li, Fuxin Wang, Jianjun Chang, Huaping Guo, Jian Zhang
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Abstract

Intracranial haemorrhage (ICH) is an urgent and potentially fatal medical condition caused by brain blood vessel rupture, leading to blood accumulation in the brain tissue. Due to the pressure and damage it causes to brain tissue, ICH results in severe neurological impairment or even death. Recently, deep neural networks have been widely applied to enhance the speed and precision of ICH detection yet they are still challenged by small or subtle hemorrhages. The authors introduce DDANet, a novel haematoma segmentation model for brain CT images. Specifically, a dilated convolution pooling block is introduced in the intermediate layers of the encoder to enhance feature extraction capabilities of middle layers. Additionally, the authors incorporate a self-attention mechanism to capture global semantic information of high-level features to guide the extraction and processing of low-level features, thereby enhancing the model's understanding of the overall structure while maintaining details. DDANet also integrates residual networks, channel attention, and spatial attention mechanisms for joint optimisation, effectively mitigating the severe class imbalance problem and aiding the training process. Experiments show that DDANet outperforms current methods, achieving the Dice coefficient, Jaccard index, sensitivity, accuracy, and a specificity of 0.712, 0.601, 0.73, 0.997, and 0.998, respectively. The code is available at https://github.com/hpguo1982/DDANet.

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DDANet:用于脑出血分割的深度扩张注意力网络。
颅内出血(ICH)是由于脑血管破裂导致血液在脑组织内积聚而引起的一种紧急且可能致命的疾病。由于对脑组织造成的压力和损害,ICH 会导致严重的神经功能损伤甚至死亡。最近,深度神经网络已被广泛应用于提高 ICH 检测的速度和精度,但它们仍然面临着小出血或微小出血的挑战。作者介绍了用于脑 CT 图像的新型血肿分割模型 DDANet。具体来说,在编码器的中间层引入了扩张卷积池块,以增强中间层的特征提取能力。此外,作者还加入了自我注意机制,以捕捉高级特征的全局语义信息,指导低级特征的提取和处理,从而在保持细节的同时增强模型对整体结构的理解。DDANet 还集成了残差网络、通道注意和空间注意机制,进行联合优化,有效缓解了严重的类不平衡问题,并有助于训练过程。实验表明,DDANet 优于现有方法,其 Dice 系数、Jaccard 指数、灵敏度、准确度和特异性分别达到了 0.712、0.601、0.73、0.997 和 0.998。代码见 https://github.com/hpguo1982/DDANet。
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来源期刊
IET Systems Biology
IET Systems Biology 生物-数学与计算生物学
CiteScore
4.20
自引率
4.30%
发文量
17
审稿时长
>12 weeks
期刊介绍: IET Systems Biology covers intra- and inter-cellular dynamics, using systems- and signal-oriented approaches. Papers that analyse genomic data in order to identify variables and basic relationships between them are considered if the results provide a basis for mathematical modelling and simulation of cellular dynamics. Manuscripts on molecular and cell biological studies are encouraged if the aim is a systems approach to dynamic interactions within and between cells. The scope includes the following topics: Genomics, transcriptomics, proteomics, metabolomics, cells, tissue and the physiome; molecular and cellular interaction, gene, cell and protein function; networks and pathways; metabolism and cell signalling; dynamics, regulation and control; systems, signals, and information; experimental data analysis; mathematical modelling, simulation and theoretical analysis; biological modelling, simulation, prediction and control; methodologies, databases, tools and algorithms for modelling and simulation; modelling, analysis and control of biological networks; synthetic biology and bioengineering based on systems biology.
期刊最新文献
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