Circadian Rhythm Mechanisms Underlying Convergent Adaptation of Unihemispheric Slow-Wave Sleep in Marine Mammals.

IF 5.3 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Molecular biology and evolution Pub Date : 2024-12-06 DOI:10.1093/molbev/msae257
Daiqing Yin, Zhenpeng Yu, Haojia Jiang, Yujie Chong, Cuijuan Zhong, Shixia Xu, Guang Yang
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Abstract

Marine mammals have evolved unihemispheric slow-wave sleep, a unique state during which one cerebral hemisphere sleeps while the other remains awake, to mitigate the fundamental conflict between sleep and wakefulness. However, the underlying mechanisms remain largely unclear. Here, we use a comparative phylogenetic approach to analyze genes associated with light-dependent circadian mechanisms, aiming to reconstruct the evolution of the circadian rhythm pathway in mammals and to identify adaptively changed components likely to have contributed to the development of unihemispheric slow-wave sleep. Specifically, among eight genes with shared signals of positive selection in two unihemispheric slow-wave sleep-specific lineages, seven genes showed direct evidence of affecting sleep and spontaneous movements. Both in vitro and in vivo experiments indicated that functional innovation in cetacean and non-phocid pinniped FBXL21, which was found to undergo positive selection, may be beneficial for decoupling sleep-wake patterns from daily rhythms to sustain continuous swimming. For cetaceans exhibiting only unihemispheric slow-wave sleep, we identified 73 genes as rapidly evolving and 92 genes containing unique amino acid substitutions. Functional assays showed that a cetacean-specific mutation (F411Y) in NFIL3 led to a decrease in repressor activity and protein stability. Furthermore, convergent amino acid replacements detected in genes related to Ca2+ signaling and CREB phosphorylation suggest their crucial role in unihemispheric slow-wave sleep adaptation. Overall, this study enhances our understanding of the evolutionary mechanisms underlying unihemispheric slow-wave sleep and provides a foundation for investigating how circadian rhythm changes contribute to variations in sleep and circadian behavior.

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海洋哺乳动物单半球慢波睡眠趋同适应的昼夜节律机制。
海洋哺乳动物已经进化出了单半球慢波睡眠(USWS),这是一种独特的状态,在这种状态下,大脑的一个半球处于睡眠状态,而另一个半球保持清醒状态,以缓解睡眠和清醒之间的根本冲突。然而,潜在的机制在很大程度上仍不清楚。在这里,我们使用比较系统发育的方法来分析与光依赖性昼夜节律机制相关的基因,旨在重建哺乳动物昼夜节律途径的进化,并确定可能导致USWS发展的适应性变化成分。具体来说,在两个usws特异性谱系中共有8个具有正选择信号的基因中,有7个基因显示出影响睡眠和自发运动的直接证据。体外和体内实验均表明,鲸目动物和非鳍状动物FBXL21的功能创新可能有助于将睡眠-觉醒模式与日常节律分离,以维持持续游泳。对于仅表现USWS的鲸类动物,我们鉴定出73个基因是快速进化的,92个基因含有独特的氨基酸取代。功能分析显示,鲸类动物特异性突变(F411Y)导致NFIL3抑制因子活性和蛋白稳定性下降。此外,在Ca2+信号和CREB磷酸化相关基因中检测到的趋同氨基酸替代表明它们在USWS适应中起着至关重要的作用。总的来说,这项研究增强了我们对USWS的进化机制的理解,并为研究昼夜节律变化如何影响睡眠和昼夜节律行为提供了基础。
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来源期刊
Molecular biology and evolution
Molecular biology and evolution 生物-进化生物学
CiteScore
19.70
自引率
3.70%
发文量
257
审稿时长
1 months
期刊介绍: Molecular Biology and Evolution Journal Overview: Publishes research at the interface of molecular (including genomics) and evolutionary biology Considers manuscripts containing patterns, processes, and predictions at all levels of organization: population, taxonomic, functional, and phenotypic Interested in fundamental discoveries, new and improved methods, resources, technologies, and theories advancing evolutionary research Publishes balanced reviews of recent developments in genome evolution and forward-looking perspectives suggesting future directions in molecular evolution applications.
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