Genome-wide identification of the bZIP family in Eutrema salsugineum and functional analysis of EsbZIP51 in regulating salt tolerance

IF 5.7 2区 生物学 Q1 PLANT SCIENCES Plant Physiology and Biochemistry Pub Date : 2025-03-01 Epub Date: 2025-01-24 DOI:10.1016/j.plaphy.2025.109562
Xiaomin Yang , Chengcheng Ji , Shuang Wang, Qinghua Yang, Jiawen Li, Shipeng He, Qiuying Pang, Aiqin Zhang
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Abstract

The halophyte Eutrema salsugineum is naturally distributed in saline-alkali soil and has been proposed as a model plant for understanding plant salt tolerance. As one of the largest and most diverse TF families, basic leucine zipper motif (bZIP) TFs perform robust functions in plant growth and environmental response, however the generalized information of EsbZIP genes and its regulatory role in salt tolerance has not been systematically studied to date. Here, we identified and characterized the bZIP members in E. salsugineum, the sequence feature and phylogeny of EsbZIPs have been exhaustively described. Through the global detection on the transcriptional pattern of EsbZIPs under salt stress, it was found that EsbZIP51 is potentially involved in the positive regulation of salt response. The transgenic plants with heterologous expression of EsbZIP51 exhibited enhanced salt tolerance, as manifested by the healthier growth phenotype and increased capacity in maintaining ion and ROS homeostasis upon salt stress. DNA affinity purification sequencing revealed that a set of candidate genes targeted by EsbZIP51, and functional validation by dual-LUC assays showed EsbZIP51 can specifically bind to the promoter of EsNHX4 and regulates the gene expression, which is required for the modulation of ion balance under salt stress. Together, this study provides insight into the genomic information of EsbZIPs and uncovers a previously uncharacterized functional genes involved in plant salt tolerance.
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盐碱鱼bZIP家族的全基因组鉴定及EsbZIP51调控耐盐性的功能分析
盐生植物Eutrema salsugineum天然分布于盐碱土壤中,被认为是了解植物耐盐性的模式植物。碱性亮氨酸拉链基序(basic leucine zipper motif, bZIP) TF家族是数量最多、种类最多的TF家族之一,在植物生长和环境响应中发挥着重要作用,但迄今为止,对其基因的一般信息及其在耐盐性中的调控作用还没有系统的研究。本文对salsugineum中bZIP成员进行了鉴定和鉴定,并对其序列特征和系统发育进行了详尽的描述。通过对盐胁迫下EsbZIP51转录模式的全球检测,发现EsbZIP51可能参与盐响应的正向调控。外源表达EsbZIP51的转基因植株表现出更强的耐盐性,表现为生长表型更健康,在盐胁迫下维持离子和ROS稳态的能力增强。DNA亲和纯化测序结果显示,EsbZIP51靶向了一组候选基因,双luc功能验证表明,EsbZIP51可以特异性结合EsNHX4启动子并调控该基因的表达,这是盐胁迫下离子平衡调节所必需的。总之,本研究提供了对EsbZIPs基因组信息的深入了解,并揭示了一个以前未被描述的与植物耐盐性有关的功能基因。
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来源期刊
Plant Physiology and Biochemistry
Plant Physiology and Biochemistry 生物-植物科学
CiteScore
11.10
自引率
3.10%
发文量
410
审稿时长
33 days
期刊介绍: Plant Physiology and Biochemistry publishes original theoretical, experimental and technical contributions in the various fields of plant physiology (biochemistry, physiology, structure, genetics, plant-microbe interactions, etc.) at diverse levels of integration (molecular, subcellular, cellular, organ, whole plant, environmental). Opinions expressed in the journal are the sole responsibility of the authors and publication does not imply the editors'' agreement. Manuscripts describing molecular-genetic and/or gene expression data that are not integrated with biochemical analysis and/or actual measurements of plant physiological processes are not suitable for PPB. Also "Omics" studies (transcriptomics, proteomics, metabolomics, etc.) reporting descriptive analysis without an element of functional validation assays, will not be considered. Similarly, applied agronomic or phytochemical studies that generate no new, fundamental insights in plant physiological and/or biochemical processes are not suitable for publication in PPB. Plant Physiology and Biochemistry publishes several types of articles: Reviews, Papers and Short Papers. Articles for Reviews are either invited by the editor or proposed by the authors for the editor''s prior agreement. Reviews should not exceed 40 typewritten pages and Short Papers no more than approximately 8 typewritten pages. The fundamental character of Plant Physiology and Biochemistry remains that of a journal for original results.
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